Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 LTBR-211ENST00000543190 785 ntTSL 3 BASIC30.58■■■□□ 2.49
CDC42BPBQ9Y5S2 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC30.58■■■□□ 2.49
CDC42BPBQ9Y5S2 CR392000.1-201ENST00000624770 1228 ntBASIC30.58■■■□□ 2.49
CDC42BPBQ9Y5S2 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
CDC42BPBQ9Y5S2 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC30.57■■■□□ 2.48
CDC42BPBQ9Y5S2 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CDC42BPBQ9Y5S2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CDC42BPBQ9Y5S2 PRR31-201ENST00000371629 978 ntTSL 2 BASIC30.57■■■□□ 2.48
CDC42BPBQ9Y5S2 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC30.57■■■□□ 2.48
CDC42BPBQ9Y5S2 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC30.57■■■□□ 2.48
CDC42BPBQ9Y5S2 AC006011.2-201ENST00000621313 1158 ntBASIC30.57■■■□□ 2.48
CDC42BPBQ9Y5S2 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC30.57■■■□□ 2.48
CDC42BPBQ9Y5S2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC30.57■■■□□ 2.48
CDC42BPBQ9Y5S2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
CDC42BPBQ9Y5S2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC30.57■■■□□ 2.48
CDC42BPBQ9Y5S2 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CDC42BPBQ9Y5S2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
CDC42BPBQ9Y5S2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CDC42BPBQ9Y5S2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC30.56■■■□□ 2.48
CDC42BPBQ9Y5S2 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
CDC42BPBQ9Y5S2 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC30.56■■■□□ 2.48
CDC42BPBQ9Y5S2 TPM1-226ENST00000560959 925 ntTSL 2 BASIC30.56■■■□□ 2.48
CDC42BPBQ9Y5S2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
CDC42BPBQ9Y5S2 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC30.55■■■□□ 2.48
CDC42BPBQ9Y5S2 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
CDC42BPBQ9Y5S2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CDC42BPBQ9Y5S2 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC30.55■■■□□ 2.48
CDC42BPBQ9Y5S2 KRT18P22-201ENST00000402024 1347 ntBASIC30.55■■■□□ 2.48
CDC42BPBQ9Y5S2 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC30.55■■■□□ 2.48
CDC42BPBQ9Y5S2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC30.55■■■□□ 2.48
CDC42BPBQ9Y5S2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CDC42BPBQ9Y5S2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
CDC42BPBQ9Y5S2 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CDC42BPBQ9Y5S2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
CDC42BPBQ9Y5S2 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC30.54■■■□□ 2.48
CDC42BPBQ9Y5S2 AC010203.1-204ENST00000548782 407 ntBASIC30.54■■■□□ 2.48
CDC42BPBQ9Y5S2 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CDC42BPBQ9Y5S2 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
CDC42BPBQ9Y5S2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
CDC42BPBQ9Y5S2 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
CDC42BPBQ9Y5S2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC30.54■■■□□ 2.48
CDC42BPBQ9Y5S2 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CDC42BPBQ9Y5S2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC30.53■■■□□ 2.48
CDC42BPBQ9Y5S2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC30.53■■■□□ 2.48
CDC42BPBQ9Y5S2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
CDC42BPBQ9Y5S2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC30.53■■■□□ 2.48
CDC42BPBQ9Y5S2 C2orf69P3-201ENST00000565542 1120 ntBASIC30.53■■■□□ 2.48
CDC42BPBQ9Y5S2 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC30.53■■■□□ 2.48
CDC42BPBQ9Y5S2 DGCR10-201ENST00000609839 495 ntBASIC30.53■■■□□ 2.48
CDC42BPBQ9Y5S2 AL024507.2-201ENST00000606070 2574 ntBASIC30.53■■■□□ 2.48
CDC42BPBQ9Y5S2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
CDC42BPBQ9Y5S2 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC30.53■■■□□ 2.48
CDC42BPBQ9Y5S2 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC30.53■■■□□ 2.48
CDC42BPBQ9Y5S2 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC30.53■■■□□ 2.48
CDC42BPBQ9Y5S2 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CDC42BPBQ9Y5S2 ARMC10P1-201ENST00000313754 855 ntBASIC30.53■■■□□ 2.48
CDC42BPBQ9Y5S2 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
CDC42BPBQ9Y5S2 TMA16-209ENST00000513272 803 ntTSL 2 BASIC30.53■■■□□ 2.48
CDC42BPBQ9Y5S2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CDC42BPBQ9Y5S2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC30.52■■■□□ 2.48
CDC42BPBQ9Y5S2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC30.52■■■□□ 2.48
CDC42BPBQ9Y5S2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CDC42BPBQ9Y5S2 KRT8P20-201ENST00000423953 1409 ntBASIC30.52■■■□□ 2.48
CDC42BPBQ9Y5S2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC30.52■■■□□ 2.48
CDC42BPBQ9Y5S2 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CDC42BPBQ9Y5S2 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CDC42BPBQ9Y5S2 YBX1P10-201ENST00000444752 975 ntBASIC30.52■■■□□ 2.48
CDC42BPBQ9Y5S2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC30.52■■■□□ 2.48
CDC42BPBQ9Y5S2 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC30.52■■■□□ 2.48
CDC42BPBQ9Y5S2 WWOX-216ENST00000569818 525 ntBASIC30.52■■■□□ 2.48
CDC42BPBQ9Y5S2 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC30.52■■■□□ 2.48
CDC42BPBQ9Y5S2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
CDC42BPBQ9Y5S2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC30.51■■■□□ 2.47
CDC42BPBQ9Y5S2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
CDC42BPBQ9Y5S2 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC30.51■■■□□ 2.47
CDC42BPBQ9Y5S2 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC30.51■■■□□ 2.47
CDC42BPBQ9Y5S2 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC30.51■■■□□ 2.47
CDC42BPBQ9Y5S2 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC30.51■■■□□ 2.47
CDC42BPBQ9Y5S2 NTF6B-201ENST00000591913 560 ntBASIC30.51■■■□□ 2.47
CDC42BPBQ9Y5S2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC30.51■■■□□ 2.47
CDC42BPBQ9Y5S2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
CDC42BPBQ9Y5S2 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
CDC42BPBQ9Y5S2 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CDC42BPBQ9Y5S2 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CDC42BPBQ9Y5S2 AL031985.4-201ENST00000642138 673 ntBASIC30.5■■■□□ 2.47
CDC42BPBQ9Y5S2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CDC42BPBQ9Y5S2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CDC42BPBQ9Y5S2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC30.5■■■□□ 2.47
CDC42BPBQ9Y5S2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CDC42BPBQ9Y5S2 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
CDC42BPBQ9Y5S2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
CDC42BPBQ9Y5S2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC30.5■■■□□ 2.47
CDC42BPBQ9Y5S2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
CDC42BPBQ9Y5S2 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC30.5■■■□□ 2.47
CDC42BPBQ9Y5S2 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC30.5■■■□□ 2.47
CDC42BPBQ9Y5S2 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
CDC42BPBQ9Y5S2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
CDC42BPBQ9Y5S2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CDC42BPBQ9Y5S2 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CDC42BPBQ9Y5S2 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms