Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AC073648.6-201ENST00000641589 218 ntBASIC18.51■□□□□ 0.55
HRH3Q9Y5N1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HRH3Q9Y5N1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HRH3Q9Y5N1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HRH3Q9Y5N1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HRH3Q9Y5N1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
HRH3Q9Y5N1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
HRH3Q9Y5N1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HRH3Q9Y5N1 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HRH3Q9Y5N1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HRH3Q9Y5N1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HRH3Q9Y5N1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.51■□□□□ 0.55
HRH3Q9Y5N1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HRH3Q9Y5N1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HRH3Q9Y5N1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.5■□□□□ 0.55
HRH3Q9Y5N1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
HRH3Q9Y5N1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HRH3Q9Y5N1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
HRH3Q9Y5N1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
HRH3Q9Y5N1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.5■□□□□ 0.55
HRH3Q9Y5N1 AP003097.1-201ENST00000530657 1135 ntBASIC18.5■□□□□ 0.55
HRH3Q9Y5N1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.5■□□□□ 0.55
HRH3Q9Y5N1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.5■□□□□ 0.55
HRH3Q9Y5N1 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HRH3Q9Y5N1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HRH3Q9Y5N1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 AC007952.6-201ENST00000573168 2673 ntBASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 AC003957.1-201ENST00000625108 2673 ntBASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.49■□□□□ 0.55
HRH3Q9Y5N1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HRH3Q9Y5N1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
HRH3Q9Y5N1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.48■□□□□ 0.55
HRH3Q9Y5N1 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HRH3Q9Y5N1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HRH3Q9Y5N1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HRH3Q9Y5N1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.48■□□□□ 0.55
HRH3Q9Y5N1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.48■□□□□ 0.55
HRH3Q9Y5N1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.48■□□□□ 0.55
HRH3Q9Y5N1 C2orf69P4-201ENST00000565394 541 ntBASIC18.48■□□□□ 0.55
HRH3Q9Y5N1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HRH3Q9Y5N1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HRH3Q9Y5N1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.48■□□□□ 0.55
HRH3Q9Y5N1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.48■□□□□ 0.55
HRH3Q9Y5N1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HRH3Q9Y5N1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.47■□□□□ 0.55
HRH3Q9Y5N1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HRH3Q9Y5N1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
HRH3Q9Y5N1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HRH3Q9Y5N1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.47■□□□□ 0.55
HRH3Q9Y5N1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
HRH3Q9Y5N1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.47■□□□□ 0.55
HRH3Q9Y5N1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HRH3Q9Y5N1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HRH3Q9Y5N1 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
HRH3Q9Y5N1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.47■□□□□ 0.55
HRH3Q9Y5N1 HLA-B-256ENST00000639848 1089 ntBASIC18.47■□□□□ 0.55
HRH3Q9Y5N1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HRH3Q9Y5N1 AC073314.1-201ENST00000568729 2216 ntBASIC18.47■□□□□ 0.55
HRH3Q9Y5N1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HRH3Q9Y5N1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HRH3Q9Y5N1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HRH3Q9Y5N1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HRH3Q9Y5N1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.47■□□□□ 0.55
HRH3Q9Y5N1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HRH3Q9Y5N1 AL157384.1-201ENST00000445995 2473 ntBASIC18.46■□□□□ 0.55
HRH3Q9Y5N1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HRH3Q9Y5N1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HRH3Q9Y5N1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HRH3Q9Y5N1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HRH3Q9Y5N1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms