Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHB1Q9Y5F3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHB1Q9Y5F3 AL162377.1-201ENST00000618844 1793 ntBASIC20.08■□□□□ 0.8
PCDHB1Q9Y5F3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHB1Q9Y5F3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHB1Q9Y5F3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
PCDHB1Q9Y5F3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB1Q9Y5F3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB1Q9Y5F3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.07■□□□□ 0.8
PCDHB1Q9Y5F3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB1Q9Y5F3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB1Q9Y5F3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB1Q9Y5F3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PCDHB1Q9Y5F3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB1Q9Y5F3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB1Q9Y5F3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB1Q9Y5F3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB1Q9Y5F3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB1Q9Y5F3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB1Q9Y5F3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PCDHB1Q9Y5F3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB1Q9Y5F3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB1Q9Y5F3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHB1Q9Y5F3 AC008550.1-201ENST00000511500 884 ntBASIC20.07■□□□□ 0.8
PCDHB1Q9Y5F3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.07■□□□□ 0.8
PCDHB1Q9Y5F3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.07■□□□□ 0.8
PCDHB1Q9Y5F3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB1Q9Y5F3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB1Q9Y5F3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
PCDHB1Q9Y5F3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB1Q9Y5F3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PCDHB1Q9Y5F3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB1Q9Y5F3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PCDHB1Q9Y5F3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB1Q9Y5F3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHB1Q9Y5F3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB1Q9Y5F3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHB1Q9Y5F3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB1Q9Y5F3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHB1Q9Y5F3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
PCDHB1Q9Y5F3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHB1Q9Y5F3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHB1Q9Y5F3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB1Q9Y5F3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHB1Q9Y5F3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PCDHB1Q9Y5F3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PCDHB1Q9Y5F3 AL512408.1-201ENST00000569378 2000 ntBASIC20.06■□□□□ 0.8
PCDHB1Q9Y5F3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHB1Q9Y5F3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB1Q9Y5F3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHB1Q9Y5F3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHB1Q9Y5F3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB1Q9Y5F3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB1Q9Y5F3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHB1Q9Y5F3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHB1Q9Y5F3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB1Q9Y5F3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB1Q9Y5F3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB1Q9Y5F3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PCDHB1Q9Y5F3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHB1Q9Y5F3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB1Q9Y5F3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB1Q9Y5F3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB1Q9Y5F3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHB1Q9Y5F3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB1Q9Y5F3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB1Q9Y5F3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB1Q9Y5F3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB1Q9Y5F3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PCDHB1Q9Y5F3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB1Q9Y5F3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHB1Q9Y5F3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.05■□□□□ 0.8
PCDHB1Q9Y5F3 AL359736.2-201ENST00000621992 437 ntBASIC20.05■□□□□ 0.8
PCDHB1Q9Y5F3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PCDHB1Q9Y5F3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB1Q9Y5F3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB1Q9Y5F3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB1Q9Y5F3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB1Q9Y5F3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB1Q9Y5F3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB1Q9Y5F3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PCDHB1Q9Y5F3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHB1Q9Y5F3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB1Q9Y5F3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PCDHB1Q9Y5F3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDHB1Q9Y5F3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB1Q9Y5F3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB1Q9Y5F3 KRT18P68-201ENST00000392293 1000 ntBASIC20.04■□□□□ 0.8
PCDHB1Q9Y5F3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.04■□□□□ 0.8
PCDHB1Q9Y5F3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB1Q9Y5F3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
PCDHB1Q9Y5F3 AC008403.3-201ENST00000598924 454 ntBASIC20.04■□□□□ 0.8
PCDHB1Q9Y5F3 CYP2T3P-201ENST00000601990 817 ntBASIC20.04■□□□□ 0.8
PCDHB1Q9Y5F3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB1Q9Y5F3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
PCDHB1Q9Y5F3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB1Q9Y5F3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB1Q9Y5F3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHB1Q9Y5F3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB1Q9Y5F3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms