Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AC112907.2-201ENST00000448639 330 ntBASIC8.34□□□□□ -1.07
MACF1Q9UPN3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC8.34□□□□□ -1.07
MACF1Q9UPN3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
MACF1Q9UPN3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
MACF1Q9UPN3 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
MACF1Q9UPN3 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC8.34□□□□□ -1.07
MACF1Q9UPN3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
MACF1Q9UPN3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC8.34□□□□□ -1.07
MACF1Q9UPN3 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
MACF1Q9UPN3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC8.34□□□□□ -1.07
MACF1Q9UPN3 AC011298.2-201ENST00000617989 482 ntBASIC8.34□□□□□ -1.07
MACF1Q9UPN3 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
MACF1Q9UPN3 AC091799.1-201ENST00000422823 811 ntBASIC8.34□□□□□ -1.07
MACF1Q9UPN3 DNAJB3-202ENST00000449667 1266 ntBASIC8.34□□□□□ -1.07
MACF1Q9UPN3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
MACF1Q9UPN3 AC141257.4-201ENST00000634557 245 ntBASIC8.34□□□□□ -1.07
MACF1Q9UPN3 AC136944.6-201ENST00000634818 245 ntBASIC8.34□□□□□ -1.07
MACF1Q9UPN3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 KRT18P31-201ENST00000506277 1292 ntBASIC8.33□□□□□ -1.08
MACF1Q9UPN3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC8.33□□□□□ -1.08
MACF1Q9UPN3 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 AL441883.1-201ENST00000566170 1045 ntBASIC8.33□□□□□ -1.08
MACF1Q9UPN3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 CYP21A1P-202ENST00000354927 1481 ntBASIC8.33□□□□□ -1.08
MACF1Q9UPN3 BX119927.1-201ENST00000636596 1552 ntBASIC8.33□□□□□ -1.08
MACF1Q9UPN3 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 RPS8P6-201ENST00000426177 609 ntBASIC8.33□□□□□ -1.08
MACF1Q9UPN3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 METTL26-204ENST00000397665 558 ntTSL 2 BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
MACF1Q9UPN3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
MACF1Q9UPN3 ANKRD20A18P-201ENST00000359341 492 ntBASIC8.32□□□□□ -1.08
MACF1Q9UPN3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
MACF1Q9UPN3 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
MACF1Q9UPN3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
MACF1Q9UPN3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
MACF1Q9UPN3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC8.32□□□□□ -1.08
MACF1Q9UPN3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
MACF1Q9UPN3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
MACF1Q9UPN3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
MACF1Q9UPN3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
MACF1Q9UPN3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
MACF1Q9UPN3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
MACF1Q9UPN3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC8.32□□□□□ -1.08
MACF1Q9UPN3 AL035252.4-201ENST00000624174 288 ntBASIC8.32□□□□□ -1.08
MACF1Q9UPN3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC8.32□□□□□ -1.08
MACF1Q9UPN3 AC116562.4-202ENST00000641738 218 ntBASIC8.32□□□□□ -1.08
MACF1Q9UPN3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
MACF1Q9UPN3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
MACF1Q9UPN3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
MACF1Q9UPN3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
MACF1Q9UPN3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms