Protein–RNA interactions for Protein: Q9UKN5

PRDM4, PR domain zinc finger protein 4, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4Q9UKN5 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PRDM4Q9UKN5 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRDM4Q9UKN5 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRDM4Q9UKN5 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRDM4Q9UKN5 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRDM4Q9UKN5 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRDM4Q9UKN5 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.7■□□□□ 0.9
PRDM4Q9UKN5 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.7■□□□□ 0.9
PRDM4Q9UKN5 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PRDM4Q9UKN5 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.7■□□□□ 0.9
PRDM4Q9UKN5 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.7■□□□□ 0.9
PRDM4Q9UKN5 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.7■□□□□ 0.9
PRDM4Q9UKN5 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRDM4Q9UKN5 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRDM4Q9UKN5 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.69■□□□□ 0.9
PRDM4Q9UKN5 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRDM4Q9UKN5 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRDM4Q9UKN5 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.69■□□□□ 0.9
PRDM4Q9UKN5 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRDM4Q9UKN5 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PRDM4Q9UKN5 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.69■□□□□ 0.9
PRDM4Q9UKN5 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
PRDM4Q9UKN5 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRDM4Q9UKN5 BICD1-207ENST00000551848 1962 ntBASIC20.69■□□□□ 0.9
PRDM4Q9UKN5 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRDM4Q9UKN5 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRDM4Q9UKN5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.69■□□□□ 0.9
PRDM4Q9UKN5 KRT125P-201ENST00000546827 989 ntBASIC20.69■□□□□ 0.9
PRDM4Q9UKN5 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PRDM4Q9UKN5 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRDM4Q9UKN5 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRDM4Q9UKN5 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PRDM4Q9UKN5 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRDM4Q9UKN5 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRDM4Q9UKN5 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRDM4Q9UKN5 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
PRDM4Q9UKN5 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRDM4Q9UKN5 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRDM4Q9UKN5 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.68■□□□□ 0.9
PRDM4Q9UKN5 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRDM4Q9UKN5 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRDM4Q9UKN5 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRDM4Q9UKN5 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.68■□□□□ 0.9
PRDM4Q9UKN5 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PRDM4Q9UKN5 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
PRDM4Q9UKN5 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRDM4Q9UKN5 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRDM4Q9UKN5 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.68■□□□□ 0.9
PRDM4Q9UKN5 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRDM4Q9UKN5 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRDM4Q9UKN5 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.68■□□□□ 0.9
PRDM4Q9UKN5 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRDM4Q9UKN5 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.68■□□□□ 0.9
PRDM4Q9UKN5 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRDM4Q9UKN5 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PRDM4Q9UKN5 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRDM4Q9UKN5 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRDM4Q9UKN5 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRDM4Q9UKN5 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRDM4Q9UKN5 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.67■□□□□ 0.9
PRDM4Q9UKN5 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PRDM4Q9UKN5 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRDM4Q9UKN5 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRDM4Q9UKN5 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRDM4Q9UKN5 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.67■□□□□ 0.9
PRDM4Q9UKN5 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PRDM4Q9UKN5 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PRDM4Q9UKN5 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRDM4Q9UKN5 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRDM4Q9UKN5 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.67■□□□□ 0.9
PRDM4Q9UKN5 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRDM4Q9UKN5 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.67■□□□□ 0.9
PRDM4Q9UKN5 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.67■□□□□ 0.9
PRDM4Q9UKN5 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PRDM4Q9UKN5 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.67■□□□□ 0.9
PRDM4Q9UKN5 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRDM4Q9UKN5 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PRDM4Q9UKN5 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRDM4Q9UKN5 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PRDM4Q9UKN5 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PRDM4Q9UKN5 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PRDM4Q9UKN5 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRDM4Q9UKN5 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PRDM4Q9UKN5 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
PRDM4Q9UKN5 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PRDM4Q9UKN5 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.66■□□□□ 0.9
PRDM4Q9UKN5 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PRDM4Q9UKN5 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRDM4Q9UKN5 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRDM4Q9UKN5 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
PRDM4Q9UKN5 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRDM4Q9UKN5 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.66■□□□□ 0.9
PRDM4Q9UKN5 MKRN4P-201ENST00000444706 1521 ntBASIC20.66■□□□□ 0.9
PRDM4Q9UKN5 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.66■□□□□ 0.9
PRDM4Q9UKN5 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.66■□□□□ 0.9
PRDM4Q9UKN5 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRDM4Q9UKN5 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRDM4Q9UKN5 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PRDM4Q9UKN5 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.66■□□□□ 0.9
PRDM4Q9UKN5 FLJ38576-201ENST00000623820 2459 ntBASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms