Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
DDX41Q9UJV9 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
DDX41Q9UJV9 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC23.05■■□□□ 1.28
DDX41Q9UJV9 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
DDX41Q9UJV9 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
DDX41Q9UJV9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
DDX41Q9UJV9 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
DDX41Q9UJV9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
DDX41Q9UJV9 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
DDX41Q9UJV9 PARN-205ENST00000539279 1557 ntTSL 2 BASIC23.05■■□□□ 1.28
DDX41Q9UJV9 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC23.05■■□□□ 1.28
DDX41Q9UJV9 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
DDX41Q9UJV9 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DDX41Q9UJV9 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
DDX41Q9UJV9 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
DDX41Q9UJV9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DDX41Q9UJV9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DDX41Q9UJV9 BAALC-201ENST00000297574 801 ntTSL 3 BASIC23.04■■□□□ 1.28
DDX41Q9UJV9 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DDX41Q9UJV9 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DDX41Q9UJV9 KRT17P3-201ENST00000420566 1262 ntBASIC23.04■■□□□ 1.28
DDX41Q9UJV9 PGM5P4-201ENST00000421970 445 ntBASIC23.04■■□□□ 1.28
DDX41Q9UJV9 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC23.04■■□□□ 1.28
DDX41Q9UJV9 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC23.04■■□□□ 1.28
DDX41Q9UJV9 AL356652.1-201ENST00000615962 565 ntBASIC23.04■■□□□ 1.28
DDX41Q9UJV9 AL359736.2-201ENST00000621992 437 ntBASIC23.04■■□□□ 1.28
DDX41Q9UJV9 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
DDX41Q9UJV9 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DDX41Q9UJV9 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DDX41Q9UJV9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DDX41Q9UJV9 MCC-208ENST00000514701 2855 ntTSL 2 BASIC23.04■■□□□ 1.28
DDX41Q9UJV9 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC23.04■■□□□ 1.28
DDX41Q9UJV9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
DDX41Q9UJV9 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC23.04■■□□□ 1.28
DDX41Q9UJV9 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
DDX41Q9UJV9 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC23.04■■□□□ 1.28
DDX41Q9UJV9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC23.04■■□□□ 1.28
DDX41Q9UJV9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
DDX41Q9UJV9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
DDX41Q9UJV9 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC23.03■■□□□ 1.28
DDX41Q9UJV9 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
DDX41Q9UJV9 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
DDX41Q9UJV9 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
DDX41Q9UJV9 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC23.03■■□□□ 1.28
DDX41Q9UJV9 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
DDX41Q9UJV9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC23.03■■□□□ 1.28
DDX41Q9UJV9 AC233263.1-201ENST00000578059 224 ntBASIC23.03■■□□□ 1.28
DDX41Q9UJV9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DDX41Q9UJV9 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
DDX41Q9UJV9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
DDX41Q9UJV9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
DDX41Q9UJV9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
DDX41Q9UJV9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
DDX41Q9UJV9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC23.02■■□□□ 1.28
DDX41Q9UJV9 AL020996.1-203ENST00000536896 2307 ntBASIC23.02■■□□□ 1.28
DDX41Q9UJV9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DDX41Q9UJV9 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
DDX41Q9UJV9 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
DDX41Q9UJV9 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DDX41Q9UJV9 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC23.02■■□□□ 1.28
DDX41Q9UJV9 KLF2-202ENST00000592003 564 ntTSL 3 BASIC23.02■■□□□ 1.28
DDX41Q9UJV9 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC23.02■■□□□ 1.28
DDX41Q9UJV9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC23.02■■□□□ 1.28
DDX41Q9UJV9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DDX41Q9UJV9 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
DDX41Q9UJV9 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC23.02■■□□□ 1.28
DDX41Q9UJV9 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
DDX41Q9UJV9 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
DDX41Q9UJV9 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
DDX41Q9UJV9 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC23.01■■□□□ 1.27
DDX41Q9UJV9 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
DDX41Q9UJV9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC23.01■■□□□ 1.27
DDX41Q9UJV9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC23.01■■□□□ 1.27
DDX41Q9UJV9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
DDX41Q9UJV9 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.01■■□□□ 1.27
DDX41Q9UJV9 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
DDX41Q9UJV9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
DDX41Q9UJV9 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.01■■□□□ 1.27
DDX41Q9UJV9 RN7SL471P-201ENST00000580476 299 ntBASIC23.01■■□□□ 1.27
DDX41Q9UJV9 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC23.01■■□□□ 1.27
DDX41Q9UJV9 BRWD1-AS2-201ENST00000603064 1028 ntBASIC23.01■■□□□ 1.27
DDX41Q9UJV9 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC23.01■■□□□ 1.27
DDX41Q9UJV9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX41Q9UJV9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX41Q9UJV9 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC23■■□□□ 1.27
DDX41Q9UJV9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC23■■□□□ 1.27
DDX41Q9UJV9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
DDX41Q9UJV9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
DDX41Q9UJV9 AC011484.1-201ENST00000377652 1995 ntBASIC23■■□□□ 1.27
DDX41Q9UJV9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC23■■□□□ 1.27
DDX41Q9UJV9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC23■■□□□ 1.27
DDX41Q9UJV9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC23■■□□□ 1.27
DDX41Q9UJV9 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC23■■□□□ 1.27
DDX41Q9UJV9 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
DDX41Q9UJV9 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC23■■□□□ 1.27
DDX41Q9UJV9 RPPH1-201ENST00000516869 333 ntBASIC23■■□□□ 1.27
DDX41Q9UJV9 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
DDX41Q9UJV9 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC23■■□□□ 1.27
DDX41Q9UJV9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
DDX41Q9UJV9 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms