Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.53■■□□□ 1.04
SIX4Q9UIU6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.53■■□□□ 1.04
SIX4Q9UIU6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SIX4Q9UIU6 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.53■■□□□ 1.04
SIX4Q9UIU6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SIX4Q9UIU6 AC124283.5-201ENST00000624661 1809 ntBASIC21.52■■□□□ 1.04
SIX4Q9UIU6 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.52■■□□□ 1.04
SIX4Q9UIU6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
SIX4Q9UIU6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SIX4Q9UIU6 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SIX4Q9UIU6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SIX4Q9UIU6 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.52■■□□□ 1.04
SIX4Q9UIU6 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SIX4Q9UIU6 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.52■■□□□ 1.04
SIX4Q9UIU6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SIX4Q9UIU6 HLA-G-202ENST00000376815 851 ntBASIC21.52■■□□□ 1.04
SIX4Q9UIU6 HLA-G-203ENST00000376818 1127 ntBASIC21.52■■□□□ 1.04
SIX4Q9UIU6 AC128676.1-201ENST00000454392 318 ntBASIC21.52■■□□□ 1.04
SIX4Q9UIU6 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.52■■□□□ 1.04
SIX4Q9UIU6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.52■■□□□ 1.04
SIX4Q9UIU6 AC073648.6-201ENST00000641589 218 ntBASIC21.52■■□□□ 1.04
SIX4Q9UIU6 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SIX4Q9UIU6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SIX4Q9UIU6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.52■■□□□ 1.04
SIX4Q9UIU6 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
SIX4Q9UIU6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SIX4Q9UIU6 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SIX4Q9UIU6 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SIX4Q9UIU6 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SIX4Q9UIU6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SIX4Q9UIU6 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.52■■□□□ 1.04
SIX4Q9UIU6 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.52■■□□□ 1.03
SIX4Q9UIU6 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
SIX4Q9UIU6 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.03
SIX4Q9UIU6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
SIX4Q9UIU6 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.51■■□□□ 1.03
SIX4Q9UIU6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
SIX4Q9UIU6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.51■■□□□ 1.03
SIX4Q9UIU6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SIX4Q9UIU6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SIX4Q9UIU6 PRORSD1P-201ENST00000295112 541 ntBASIC21.51■■□□□ 1.03
SIX4Q9UIU6 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SIX4Q9UIU6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SIX4Q9UIU6 POM121L13P-201ENST00000422362 380 ntBASIC21.51■■□□□ 1.03
SIX4Q9UIU6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.51■■□□□ 1.03
SIX4Q9UIU6 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SIX4Q9UIU6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.51■■□□□ 1.03
SIX4Q9UIU6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.51■■□□□ 1.03
SIX4Q9UIU6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SIX4Q9UIU6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.51■■□□□ 1.03
SIX4Q9UIU6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SIX4Q9UIU6 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.51■■□□□ 1.03
SIX4Q9UIU6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
SIX4Q9UIU6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.51■■□□□ 1.03
SIX4Q9UIU6 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
SIX4Q9UIU6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SIX4Q9UIU6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.5■■□□□ 1.03
SIX4Q9UIU6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SIX4Q9UIU6 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.5■■□□□ 1.03
SIX4Q9UIU6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.5■■□□□ 1.03
SIX4Q9UIU6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.5■■□□□ 1.03
SIX4Q9UIU6 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SIX4Q9UIU6 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SIX4Q9UIU6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.5■■□□□ 1.03
SIX4Q9UIU6 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SIX4Q9UIU6 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.49■■□□□ 1.03
SIX4Q9UIU6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SIX4Q9UIU6 BX119927.1-201ENST00000636596 1552 ntBASIC21.49■■□□□ 1.03
SIX4Q9UIU6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SIX4Q9UIU6 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.49■■□□□ 1.03
SIX4Q9UIU6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SIX4Q9UIU6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SIX4Q9UIU6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SIX4Q9UIU6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SIX4Q9UIU6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SIX4Q9UIU6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.49■■□□□ 1.03
SIX4Q9UIU6 RPS2P52-201ENST00000469610 820 ntBASIC21.49■■□□□ 1.03
SIX4Q9UIU6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.49■■□□□ 1.03
SIX4Q9UIU6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SIX4Q9UIU6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.49■■□□□ 1.03
SIX4Q9UIU6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SIX4Q9UIU6 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SIX4Q9UIU6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SIX4Q9UIU6 AL391422.3-201ENST00000603791 2761 ntBASIC21.49■■□□□ 1.03
SIX4Q9UIU6 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SIX4Q9UIU6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SIX4Q9UIU6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.49■■□□□ 1.03
SIX4Q9UIU6 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SIX4Q9UIU6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.49■■□□□ 1.03
SIX4Q9UIU6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
SIX4Q9UIU6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SIX4Q9UIU6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SIX4Q9UIU6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SIX4Q9UIU6 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.48■■□□□ 1.03
SIX4Q9UIU6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.48■■□□□ 1.03
SIX4Q9UIU6 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.48■■□□□ 1.03
SIX4Q9UIU6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SIX4Q9UIU6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SIX4Q9UIU6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SIX4Q9UIU6 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms