Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 AC012306.2-201ENST00000609350 630 ntBASIC20.48■□□□□ 0.87
EBF1Q9UH73 AL356652.1-201ENST00000615962 565 ntBASIC20.48■□□□□ 0.87
EBF1Q9UH73 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
EBF1Q9UH73 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.48■□□□□ 0.87
EBF1Q9UH73 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.48■□□□□ 0.87
EBF1Q9UH73 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
EBF1Q9UH73 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.48■□□□□ 0.87
EBF1Q9UH73 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
EBF1Q9UH73 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.47■□□□□ 0.87
EBF1Q9UH73 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EBF1Q9UH73 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EBF1Q9UH73 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.47■□□□□ 0.87
EBF1Q9UH73 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EBF1Q9UH73 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EBF1Q9UH73 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EBF1Q9UH73 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EBF1Q9UH73 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.47■□□□□ 0.87
EBF1Q9UH73 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.47■□□□□ 0.87
EBF1Q9UH73 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.47■□□□□ 0.87
EBF1Q9UH73 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.47■□□□□ 0.87
EBF1Q9UH73 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
EBF1Q9UH73 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
EBF1Q9UH73 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.47■□□□□ 0.87
EBF1Q9UH73 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.47■□□□□ 0.87
EBF1Q9UH73 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.47■□□□□ 0.87
EBF1Q9UH73 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
EBF1Q9UH73 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.47■□□□□ 0.87
EBF1Q9UH73 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EBF1Q9UH73 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EBF1Q9UH73 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
EBF1Q9UH73 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
EBF1Q9UH73 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
EBF1Q9UH73 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
EBF1Q9UH73 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
EBF1Q9UH73 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
EBF1Q9UH73 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EBF1Q9UH73 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
EBF1Q9UH73 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EBF1Q9UH73 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
EBF1Q9UH73 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
EBF1Q9UH73 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EBF1Q9UH73 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EBF1Q9UH73 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.46■□□□□ 0.87
EBF1Q9UH73 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
EBF1Q9UH73 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
EBF1Q9UH73 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
EBF1Q9UH73 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
EBF1Q9UH73 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
EBF1Q9UH73 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
EBF1Q9UH73 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
EBF1Q9UH73 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.45■□□□□ 0.86
EBF1Q9UH73 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
EBF1Q9UH73 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
EBF1Q9UH73 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
EBF1Q9UH73 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
EBF1Q9UH73 TSPY15P-201ENST00000457163 923 ntBASIC20.45■□□□□ 0.86
EBF1Q9UH73 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.45■□□□□ 0.86
EBF1Q9UH73 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.45■□□□□ 0.86
EBF1Q9UH73 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.45■□□□□ 0.86
EBF1Q9UH73 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
EBF1Q9UH73 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EBF1Q9UH73 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EBF1Q9UH73 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
EBF1Q9UH73 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.45■□□□□ 0.86
EBF1Q9UH73 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.45■□□□□ 0.86
EBF1Q9UH73 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EBF1Q9UH73 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
EBF1Q9UH73 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
EBF1Q9UH73 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.44■□□□□ 0.86
EBF1Q9UH73 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
EBF1Q9UH73 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EBF1Q9UH73 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.44■□□□□ 0.86
EBF1Q9UH73 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.44■□□□□ 0.86
EBF1Q9UH73 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
EBF1Q9UH73 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
EBF1Q9UH73 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
EBF1Q9UH73 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.44■□□□□ 0.86
EBF1Q9UH73 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.44■□□□□ 0.86
EBF1Q9UH73 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.44■□□□□ 0.86
EBF1Q9UH73 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EBF1Q9UH73 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.44■□□□□ 0.86
EBF1Q9UH73 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
EBF1Q9UH73 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.44■□□□□ 0.86
EBF1Q9UH73 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.44■□□□□ 0.86
EBF1Q9UH73 AL355075.4-201ENST00000554988 638 ntBASIC20.44■□□□□ 0.86
EBF1Q9UH73 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.44■□□□□ 0.86
EBF1Q9UH73 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
EBF1Q9UH73 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
EBF1Q9UH73 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.44■□□□□ 0.86
EBF1Q9UH73 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.44■□□□□ 0.86
EBF1Q9UH73 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.44■□□□□ 0.86
EBF1Q9UH73 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EBF1Q9UH73 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EBF1Q9UH73 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.44■□□□□ 0.86
EBF1Q9UH73 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
EBF1Q9UH73 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
EBF1Q9UH73 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
EBF1Q9UH73 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EBF1Q9UH73 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
EBF1Q9UH73 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms