Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DKK4Q9UBT3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DKK4Q9UBT3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DKK4Q9UBT3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.82■□□□□ 0.6
DKK4Q9UBT3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
DKK4Q9UBT3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
DKK4Q9UBT3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DKK4Q9UBT3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DKK4Q9UBT3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
DKK4Q9UBT3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.82■□□□□ 0.6
DKK4Q9UBT3 B3GAT3P1-201ENST00000471720 806 ntBASIC18.82■□□□□ 0.6
DKK4Q9UBT3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.82■□□□□ 0.6
DKK4Q9UBT3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.82■□□□□ 0.6
DKK4Q9UBT3 AL691432.3-201ENST00000621860 400 ntBASIC18.82■□□□□ 0.6
DKK4Q9UBT3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.82■□□□□ 0.6
DKK4Q9UBT3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.82■□□□□ 0.6
DKK4Q9UBT3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DKK4Q9UBT3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DKK4Q9UBT3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.82■□□□□ 0.6
DKK4Q9UBT3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
DKK4Q9UBT3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DKK4Q9UBT3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
DKK4Q9UBT3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DKK4Q9UBT3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
DKK4Q9UBT3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DKK4Q9UBT3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
DKK4Q9UBT3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
DKK4Q9UBT3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
DKK4Q9UBT3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
DKK4Q9UBT3 YBX1P2-201ENST00000489612 999 ntBASIC18.81■□□□□ 0.6
DKK4Q9UBT3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.81■□□□□ 0.6
DKK4Q9UBT3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.81■□□□□ 0.6
DKK4Q9UBT3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.81■□□□□ 0.6
DKK4Q9UBT3 AC139887.4-201ENST00000607877 719 ntBASIC18.81■□□□□ 0.6
DKK4Q9UBT3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.81■□□□□ 0.6
DKK4Q9UBT3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
DKK4Q9UBT3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.81■□□□□ 0.6
DKK4Q9UBT3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.81■□□□□ 0.6
DKK4Q9UBT3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.81■□□□□ 0.6
DKK4Q9UBT3 IER3-202ENST00000376377 1350 ntBASIC18.81■□□□□ 0.6
DKK4Q9UBT3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DKK4Q9UBT3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.8■□□□□ 0.6
DKK4Q9UBT3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DKK4Q9UBT3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DKK4Q9UBT3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DKK4Q9UBT3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DKK4Q9UBT3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DKK4Q9UBT3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DKK4Q9UBT3 AC092647.4-201ENST00000457211 535 ntBASIC18.8■□□□□ 0.6
DKK4Q9UBT3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.8■□□□□ 0.6
DKK4Q9UBT3 AC097488.1-201ENST00000507834 756 ntBASIC18.8■□□□□ 0.6
DKK4Q9UBT3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.8■□□□□ 0.6
DKK4Q9UBT3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.8■□□□□ 0.6
DKK4Q9UBT3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.8■□□□□ 0.6
DKK4Q9UBT3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DKK4Q9UBT3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.8■□□□□ 0.6
DKK4Q9UBT3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
DKK4Q9UBT3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.8■□□□□ 0.6
DKK4Q9UBT3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.8■□□□□ 0.6
DKK4Q9UBT3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DKK4Q9UBT3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
DKK4Q9UBT3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DKK4Q9UBT3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DKK4Q9UBT3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DKK4Q9UBT3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DKK4Q9UBT3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.79■□□□□ 0.6
DKK4Q9UBT3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DKK4Q9UBT3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
DKK4Q9UBT3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.79■□□□□ 0.6
DKK4Q9UBT3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.79■□□□□ 0.6
DKK4Q9UBT3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
DKK4Q9UBT3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DKK4Q9UBT3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DKK4Q9UBT3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DKK4Q9UBT3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.78■□□□□ 0.6
DKK4Q9UBT3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
DKK4Q9UBT3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
DKK4Q9UBT3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
DKK4Q9UBT3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DKK4Q9UBT3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
DKK4Q9UBT3 COX11P1-201ENST00000489116 835 ntBASIC18.78■□□□□ 0.6
DKK4Q9UBT3 C1QL1P1-201ENST00000568105 661 ntBASIC18.78■□□□□ 0.6
DKK4Q9UBT3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DKK4Q9UBT3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.78■□□□□ 0.6
DKK4Q9UBT3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.78■□□□□ 0.6
DKK4Q9UBT3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.78■□□□□ 0.6
DKK4Q9UBT3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.78■□□□□ 0.6
DKK4Q9UBT3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.78■□□□□ 0.6
DKK4Q9UBT3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DKK4Q9UBT3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
DKK4Q9UBT3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DKK4Q9UBT3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DKK4Q9UBT3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DKK4Q9UBT3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DKK4Q9UBT3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
DKK4Q9UBT3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
DKK4Q9UBT3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.77■□□□□ 0.6
DKK4Q9UBT3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DKK4Q9UBT3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DKK4Q9UBT3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms