Protein–RNA interactions for Protein: Q9UBR1

UPB1, Beta-ureidopropionase, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPB1Q9UBR1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPB1Q9UBR1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
UPB1Q9UBR1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPB1Q9UBR1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPB1Q9UBR1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.05■□□□□ 0.48
UPB1Q9UBR1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPB1Q9UBR1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.05■□□□□ 0.48
UPB1Q9UBR1 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPB1Q9UBR1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPB1Q9UBR1 RNF165-205ENST00000588679 2904 ntBASIC18.05■□□□□ 0.48
UPB1Q9UBR1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UPB1Q9UBR1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.05■□□□□ 0.48
UPB1Q9UBR1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.05■□□□□ 0.48
UPB1Q9UBR1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.05■□□□□ 0.48
UPB1Q9UBR1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.05■□□□□ 0.48
UPB1Q9UBR1 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.05■□□□□ 0.48
UPB1Q9UBR1 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.05■□□□□ 0.48
UPB1Q9UBR1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPB1Q9UBR1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPB1Q9UBR1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPB1Q9UBR1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPB1Q9UBR1 AC087633.2-202ENST00000565166 1439 ntBASIC18.05■□□□□ 0.48
UPB1Q9UBR1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPB1Q9UBR1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPB1Q9UBR1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
UPB1Q9UBR1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPB1Q9UBR1 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
UPB1Q9UBR1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.04■□□□□ 0.48
UPB1Q9UBR1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPB1Q9UBR1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.04■□□□□ 0.48
UPB1Q9UBR1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
UPB1Q9UBR1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
UPB1Q9UBR1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UPB1Q9UBR1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPB1Q9UBR1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
UPB1Q9UBR1 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.04■□□□□ 0.48
UPB1Q9UBR1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.04■□□□□ 0.48
UPB1Q9UBR1 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.04■□□□□ 0.48
UPB1Q9UBR1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UPB1Q9UBR1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
UPB1Q9UBR1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPB1Q9UBR1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPB1Q9UBR1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
UPB1Q9UBR1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPB1Q9UBR1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
UPB1Q9UBR1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPB1Q9UBR1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.04■□□□□ 0.48
UPB1Q9UBR1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.03■□□□□ 0.48
UPB1Q9UBR1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UPB1Q9UBR1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.03■□□□□ 0.48
UPB1Q9UBR1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
UPB1Q9UBR1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
UPB1Q9UBR1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UPB1Q9UBR1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.03■□□□□ 0.48
UPB1Q9UBR1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPB1Q9UBR1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.03■□□□□ 0.48
UPB1Q9UBR1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
UPB1Q9UBR1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPB1Q9UBR1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.03■□□□□ 0.48
UPB1Q9UBR1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPB1Q9UBR1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPB1Q9UBR1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPB1Q9UBR1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPB1Q9UBR1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPB1Q9UBR1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.03■□□□□ 0.48
UPB1Q9UBR1 AL138781.1-201ENST00000566567 1274 ntBASIC18.03■□□□□ 0.48
UPB1Q9UBR1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.03■□□□□ 0.48
UPB1Q9UBR1 AL356652.1-201ENST00000615962 565 ntBASIC18.03■□□□□ 0.48
UPB1Q9UBR1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.03■□□□□ 0.48
UPB1Q9UBR1 AC133041.1-202ENST00000642053 222 ntBASIC18.03■□□□□ 0.48
UPB1Q9UBR1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.03■□□□□ 0.48
UPB1Q9UBR1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPB1Q9UBR1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UPB1Q9UBR1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPB1Q9UBR1 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPB1Q9UBR1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UPB1Q9UBR1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPB1Q9UBR1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.02■□□□□ 0.48
UPB1Q9UBR1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
UPB1Q9UBR1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPB1Q9UBR1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
UPB1Q9UBR1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPB1Q9UBR1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPB1Q9UBR1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.02■□□□□ 0.48
UPB1Q9UBR1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.02■□□□□ 0.48
UPB1Q9UBR1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
UPB1Q9UBR1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.02■□□□□ 0.48
UPB1Q9UBR1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.02■□□□□ 0.48
UPB1Q9UBR1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
UPB1Q9UBR1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
UPB1Q9UBR1 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.02■□□□□ 0.48
UPB1Q9UBR1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.02■□□□□ 0.48
UPB1Q9UBR1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.02■□□□□ 0.48
UPB1Q9UBR1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.02■□□□□ 0.48
UPB1Q9UBR1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.02■□□□□ 0.48
UPB1Q9UBR1 MIR2861-201ENST00000636310 90 ntBASIC18.02■□□□□ 0.48
UPB1Q9UBR1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.47
UPB1Q9UBR1 KRT17P1-201ENST00000399211 1546 ntBASIC18.02■□□□□ 0.47
UPB1Q9UBR1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
UPB1Q9UBR1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms