Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.28■□□□□ 0.84
HACD3Q9P035 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.28■□□□□ 0.84
HACD3Q9P035 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
HACD3Q9P035 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
HACD3Q9P035 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.27■□□□□ 0.84
HACD3Q9P035 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
HACD3Q9P035 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HACD3Q9P035 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HACD3Q9P035 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.27■□□□□ 0.84
HACD3Q9P035 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HACD3Q9P035 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
HACD3Q9P035 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
HACD3Q9P035 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HACD3Q9P035 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
HACD3Q9P035 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
HACD3Q9P035 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HACD3Q9P035 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HACD3Q9P035 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HACD3Q9P035 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.27■□□□□ 0.84
HACD3Q9P035 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
HACD3Q9P035 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HACD3Q9P035 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
HACD3Q9P035 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.27■□□□□ 0.84
HACD3Q9P035 C2orf69P4-201ENST00000565394 541 ntBASIC20.27■□□□□ 0.84
HACD3Q9P035 MIR4758-201ENST00000577688 71 ntBASIC20.27■□□□□ 0.84
HACD3Q9P035 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HACD3Q9P035 AL109923.1-201ENST00000618799 583 ntBASIC20.27■□□□□ 0.84
HACD3Q9P035 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.27■□□□□ 0.84
HACD3Q9P035 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HACD3Q9P035 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
HACD3Q9P035 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.27■□□□□ 0.83
HACD3Q9P035 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.27■□□□□ 0.83
HACD3Q9P035 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HACD3Q9P035 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
HACD3Q9P035 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
HACD3Q9P035 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.26■□□□□ 0.83
HACD3Q9P035 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HACD3Q9P035 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HACD3Q9P035 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HACD3Q9P035 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
HACD3Q9P035 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.26■□□□□ 0.83
HACD3Q9P035 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HACD3Q9P035 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.26■□□□□ 0.83
HACD3Q9P035 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
HACD3Q9P035 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HACD3Q9P035 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.26■□□□□ 0.83
HACD3Q9P035 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HACD3Q9P035 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HACD3Q9P035 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HACD3Q9P035 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.25■□□□□ 0.83
HACD3Q9P035 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HACD3Q9P035 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HACD3Q9P035 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HACD3Q9P035 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
HACD3Q9P035 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
HACD3Q9P035 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HACD3Q9P035 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
HACD3Q9P035 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.25■□□□□ 0.83
HACD3Q9P035 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.25■□□□□ 0.83
HACD3Q9P035 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
HACD3Q9P035 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HACD3Q9P035 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HACD3Q9P035 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HACD3Q9P035 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HACD3Q9P035 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HACD3Q9P035 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.25■□□□□ 0.83
HACD3Q9P035 DPP3P2-201ENST00000416030 1696 ntBASIC20.25■□□□□ 0.83
HACD3Q9P035 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HACD3Q9P035 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HACD3Q9P035 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HACD3Q9P035 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HACD3Q9P035 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.24■□□□□ 0.83
HACD3Q9P035 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HACD3Q9P035 AC138932.1-201ENST00000534164 6830 ntBASIC20.24■□□□□ 0.83
HACD3Q9P035 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
HACD3Q9P035 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HACD3Q9P035 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HACD3Q9P035 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.24■□□□□ 0.83
HACD3Q9P035 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HACD3Q9P035 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
HACD3Q9P035 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.24■□□□□ 0.83
HACD3Q9P035 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HACD3Q9P035 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HACD3Q9P035 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HACD3Q9P035 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HACD3Q9P035 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HACD3Q9P035 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.24■□□□□ 0.83
HACD3Q9P035 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
HACD3Q9P035 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
HACD3Q9P035 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
HACD3Q9P035 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HACD3Q9P035 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.23■□□□□ 0.83
HACD3Q9P035 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
HACD3Q9P035 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.23■□□□□ 0.83
HACD3Q9P035 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.23■□□□□ 0.83
HACD3Q9P035 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
HACD3Q9P035 AC104771.1-201ENST00000603335 964 ntBASIC20.23■□□□□ 0.83
HACD3Q9P035 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HACD3Q9P035 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.23■□□□□ 0.83
HACD3Q9P035 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms