Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD9Q9P000 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD9Q9P000 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD9Q9P000 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD9Q9P000 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD9Q9P000 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD9Q9P000 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD9Q9P000 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
COMMD9Q9P000 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD9Q9P000 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD9Q9P000 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.07■□□□□ 0.32
COMMD9Q9P000 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD9Q9P000 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD9Q9P000 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.06■□□□□ 0.32
COMMD9Q9P000 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD9Q9P000 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD9Q9P000 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD9Q9P000 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
COMMD9Q9P000 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.06■□□□□ 0.32
COMMD9Q9P000 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.06■□□□□ 0.32
COMMD9Q9P000 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD9Q9P000 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
COMMD9Q9P000 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD9Q9P000 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD9Q9P000 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
COMMD9Q9P000 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD9Q9P000 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD9Q9P000 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD9Q9P000 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.06■□□□□ 0.32
COMMD9Q9P000 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.06■□□□□ 0.32
COMMD9Q9P000 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
COMMD9Q9P000 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.05■□□□□ 0.32
COMMD9Q9P000 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COMMD9Q9P000 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
COMMD9Q9P000 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COMMD9Q9P000 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COMMD9Q9P000 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.05■□□□□ 0.32
COMMD9Q9P000 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COMMD9Q9P000 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
COMMD9Q9P000 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COMMD9Q9P000 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COMMD9Q9P000 AC133561.4-201ENST00000566112 224 ntBASIC17.05■□□□□ 0.32
COMMD9Q9P000 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.05■□□□□ 0.32
COMMD9Q9P000 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.05■□□□□ 0.32
COMMD9Q9P000 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.05■□□□□ 0.32
COMMD9Q9P000 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.05■□□□□ 0.32
COMMD9Q9P000 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.05■□□□□ 0.32
COMMD9Q9P000 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
COMMD9Q9P000 LETM1P2-201ENST00000597330 2178 ntBASIC17.05■□□□□ 0.32
COMMD9Q9P000 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
COMMD9Q9P000 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COMMD9Q9P000 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
COMMD9Q9P000 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COMMD9Q9P000 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD9Q9P000 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD9Q9P000 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD9Q9P000 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD9Q9P000 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD9Q9P000 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD9Q9P000 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD9Q9P000 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD9Q9P000 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD9Q9P000 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.04■□□□□ 0.32
COMMD9Q9P000 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD9Q9P000 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD9Q9P000 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD9Q9P000 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD9Q9P000 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD9Q9P000 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD9Q9P000 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
COMMD9Q9P000 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD9Q9P000 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD9Q9P000 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD9Q9P000 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD9Q9P000 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.04■□□□□ 0.32
COMMD9Q9P000 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
COMMD9Q9P000 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD9Q9P000 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD9Q9P000 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD9Q9P000 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD9Q9P000 AC009237.3-201ENST00000393279 1427 ntBASIC17.04■□□□□ 0.32
COMMD9Q9P000 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.04■□□□□ 0.32
COMMD9Q9P000 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD9Q9P000 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.03■□□□□ 0.32
COMMD9Q9P000 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COMMD9Q9P000 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
COMMD9Q9P000 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COMMD9Q9P000 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.03■□□□□ 0.32
COMMD9Q9P000 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
COMMD9Q9P000 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.03■□□□□ 0.32
COMMD9Q9P000 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COMMD9Q9P000 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COMMD9Q9P000 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
COMMD9Q9P000 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COMMD9Q9P000 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
COMMD9Q9P000 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
COMMD9Q9P000 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COMMD9Q9P000 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
COMMD9Q9P000 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COMMD9Q9P000 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms