Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.63■□□□□ 0.25
CALYQ9NYX4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CALYQ9NYX4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CALYQ9NYX4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.62■□□□□ 0.25
CALYQ9NYX4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CALYQ9NYX4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CALYQ9NYX4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.62■□□□□ 0.25
CALYQ9NYX4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CALYQ9NYX4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CALYQ9NYX4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CALYQ9NYX4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CALYQ9NYX4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CALYQ9NYX4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CALYQ9NYX4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CALYQ9NYX4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.62■□□□□ 0.25
CALYQ9NYX4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.62■□□□□ 0.25
CALYQ9NYX4 RAP2CP1-201ENST00000605103 478 ntBASIC16.62■□□□□ 0.25
CALYQ9NYX4 AL050303.2-201ENST00000619798 666 ntBASIC16.62■□□□□ 0.25
CALYQ9NYX4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CALYQ9NYX4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
CALYQ9NYX4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.62■□□□□ 0.25
CALYQ9NYX4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CALYQ9NYX4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.62■□□□□ 0.25
CALYQ9NYX4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CALYQ9NYX4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CALYQ9NYX4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.62■□□□□ 0.25
CALYQ9NYX4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.62■□□□□ 0.25
CALYQ9NYX4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CALYQ9NYX4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.61■□□□□ 0.25
CALYQ9NYX4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.61■□□□□ 0.25
CALYQ9NYX4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.61■□□□□ 0.25
CALYQ9NYX4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CALYQ9NYX4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.61■□□□□ 0.25
CALYQ9NYX4 AF201337.1-201ENST00000520239 748 ntBASIC16.61■□□□□ 0.25
CALYQ9NYX4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CALYQ9NYX4 AC105036.2-201ENST00000569468 176 ntBASIC16.61■□□□□ 0.25
CALYQ9NYX4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.61■□□□□ 0.25
CALYQ9NYX4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CALYQ9NYX4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.61■□□□□ 0.25
CALYQ9NYX4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.61■□□□□ 0.25
CALYQ9NYX4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CALYQ9NYX4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CALYQ9NYX4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.61■□□□□ 0.25
CALYQ9NYX4 TCF3P1-201ENST00000423021 1937 ntBASIC16.6■□□□□ 0.25
CALYQ9NYX4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CALYQ9NYX4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CALYQ9NYX4 KRT17P1-201ENST00000399211 1546 ntBASIC16.6■□□□□ 0.25
CALYQ9NYX4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CALYQ9NYX4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CALYQ9NYX4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CALYQ9NYX4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.6■□□□□ 0.25
CALYQ9NYX4 CROCCP5-201ENST00000436658 830 ntBASIC16.6■□□□□ 0.25
CALYQ9NYX4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CALYQ9NYX4 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.6■□□□□ 0.25
CALYQ9NYX4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CALYQ9NYX4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.6■□□□□ 0.25
CALYQ9NYX4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CALYQ9NYX4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CALYQ9NYX4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.6■□□□□ 0.25
CALYQ9NYX4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.6■□□□□ 0.25
CALYQ9NYX4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.6■□□□□ 0.25
CALYQ9NYX4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CALYQ9NYX4 AIRN-201ENST00000601203 4374 ntBASIC16.6■□□□□ 0.25
CALYQ9NYX4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CALYQ9NYX4 MKRN4P-201ENST00000444706 1521 ntBASIC16.6■□□□□ 0.25
CALYQ9NYX4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CALYQ9NYX4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.6■□□□□ 0.25
CALYQ9NYX4 BX119927.1-201ENST00000636596 1552 ntBASIC16.6■□□□□ 0.25
CALYQ9NYX4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CALYQ9NYX4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.59■□□□□ 0.25
CALYQ9NYX4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CALYQ9NYX4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CALYQ9NYX4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CALYQ9NYX4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CALYQ9NYX4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CALYQ9NYX4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CALYQ9NYX4 LSM12P1-201ENST00000411836 588 ntBASIC16.59■□□□□ 0.25
CALYQ9NYX4 AC006970.2-201ENST00000450065 779 ntBASIC16.59■□□□□ 0.25
CALYQ9NYX4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.59■□□□□ 0.25
CALYQ9NYX4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.59■□□□□ 0.25
CALYQ9NYX4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.59■□□□□ 0.25
CALYQ9NYX4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CALYQ9NYX4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.59■□□□□ 0.25
CALYQ9NYX4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.59■□□□□ 0.25
CALYQ9NYX4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CALYQ9NYX4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CALYQ9NYX4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CALYQ9NYX4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CALYQ9NYX4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
CALYQ9NYX4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CALYQ9NYX4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CALYQ9NYX4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CALYQ9NYX4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CALYQ9NYX4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CALYQ9NYX4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
CALYQ9NYX4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CALYQ9NYX4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.58■□□□□ 0.25
CALYQ9NYX4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CALYQ9NYX4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CALYQ9NYX4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms