Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.36■□□□□ 0.69
SPHK1Q9NYA1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SPHK1Q9NYA1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SPHK1Q9NYA1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPHK1Q9NYA1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPHK1Q9NYA1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.35■□□□□ 0.69
SPHK1Q9NYA1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPHK1Q9NYA1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SPHK1Q9NYA1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPHK1Q9NYA1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SPHK1Q9NYA1 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.35■□□□□ 0.69
SPHK1Q9NYA1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.35■□□□□ 0.69
SPHK1Q9NYA1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.35■□□□□ 0.69
SPHK1Q9NYA1 AC233263.1-201ENST00000578059 224 ntBASIC19.35■□□□□ 0.69
SPHK1Q9NYA1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.35■□□□□ 0.69
SPHK1Q9NYA1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.35■□□□□ 0.69
SPHK1Q9NYA1 ITM2C-210ENST00000620962 501 ntBASIC19.35■□□□□ 0.69
SPHK1Q9NYA1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPHK1Q9NYA1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SPHK1Q9NYA1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.35■□□□□ 0.69
SPHK1Q9NYA1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.35■□□□□ 0.69
SPHK1Q9NYA1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPHK1Q9NYA1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.35■□□□□ 0.69
SPHK1Q9NYA1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPHK1Q9NYA1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPHK1Q9NYA1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SPHK1Q9NYA1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPHK1Q9NYA1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.34■□□□□ 0.69
SPHK1Q9NYA1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.34■□□□□ 0.69
SPHK1Q9NYA1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPHK1Q9NYA1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPHK1Q9NYA1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SPHK1Q9NYA1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPHK1Q9NYA1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPHK1Q9NYA1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.34■□□□□ 0.69
SPHK1Q9NYA1 AC128676.1-201ENST00000454392 318 ntBASIC19.34■□□□□ 0.69
SPHK1Q9NYA1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SPHK1Q9NYA1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.34■□□□□ 0.69
SPHK1Q9NYA1 AL031963.3-201ENST00000606441 850 ntBASIC19.34■□□□□ 0.69
SPHK1Q9NYA1 AC073648.6-201ENST00000641589 218 ntBASIC19.34■□□□□ 0.69
SPHK1Q9NYA1 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SPHK1Q9NYA1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPHK1Q9NYA1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPHK1Q9NYA1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.34■□□□□ 0.69
SPHK1Q9NYA1 KRT8P20-201ENST00000423953 1409 ntBASIC19.34■□□□□ 0.69
SPHK1Q9NYA1 KRT8P17-201ENST00000453110 1448 ntBASIC19.34■□□□□ 0.69
SPHK1Q9NYA1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SPHK1Q9NYA1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SPHK1Q9NYA1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SPHK1Q9NYA1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SPHK1Q9NYA1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
SPHK1Q9NYA1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SPHK1Q9NYA1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SPHK1Q9NYA1 PRORSD1P-201ENST00000295112 541 ntBASIC19.33■□□□□ 0.68
SPHK1Q9NYA1 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SPHK1Q9NYA1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SPHK1Q9NYA1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SPHK1Q9NYA1 KRT18P29-201ENST00000397031 1267 ntBASIC19.33■□□□□ 0.68
SPHK1Q9NYA1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SPHK1Q9NYA1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.33■□□□□ 0.68
SPHK1Q9NYA1 AC120498.8-201ENST00000614275 531 ntBASIC19.33■□□□□ 0.68
SPHK1Q9NYA1 TMEM191A-211ENST00000637163 1067 ntBASIC19.33■□□□□ 0.68
SPHK1Q9NYA1 AL512408.1-201ENST00000569378 2000 ntBASIC19.33■□□□□ 0.68
SPHK1Q9NYA1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.33■□□□□ 0.68
SPHK1Q9NYA1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SPHK1Q9NYA1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SPHK1Q9NYA1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.33■□□□□ 0.68
SPHK1Q9NYA1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SPHK1Q9NYA1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SPHK1Q9NYA1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
SPHK1Q9NYA1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.32■□□□□ 0.68
SPHK1Q9NYA1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPHK1Q9NYA1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPHK1Q9NYA1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SPHK1Q9NYA1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SPHK1Q9NYA1 HLA-G-202ENST00000376815 851 ntBASIC19.32■□□□□ 0.68
SPHK1Q9NYA1 HLA-G-203ENST00000376818 1127 ntBASIC19.32■□□□□ 0.68
SPHK1Q9NYA1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPHK1Q9NYA1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.32■□□□□ 0.68
SPHK1Q9NYA1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPHK1Q9NYA1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SPHK1Q9NYA1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SPHK1Q9NYA1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SPHK1Q9NYA1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SPHK1Q9NYA1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPHK1Q9NYA1 LINC01006-201ENST00000333319 2292 ntBASIC19.32■□□□□ 0.68
SPHK1Q9NYA1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPHK1Q9NYA1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SPHK1Q9NYA1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SPHK1Q9NYA1 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPHK1Q9NYA1 AC124283.5-201ENST00000624661 1809 ntBASIC19.32■□□□□ 0.68
SPHK1Q9NYA1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPHK1Q9NYA1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.32■□□□□ 0.68
SPHK1Q9NYA1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SPHK1Q9NYA1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPHK1Q9NYA1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPHK1Q9NYA1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SPHK1Q9NYA1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SPHK1Q9NYA1 GABARAPL3-202ENST00000624044 1851 ntBASIC19.31■□□□□ 0.68
SPHK1Q9NYA1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms