Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
THUMPD1Q9NXG2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.85■□□□□ 0.61
THUMPD1Q9NXG2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.85■□□□□ 0.61
THUMPD1Q9NXG2 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
THUMPD1Q9NXG2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
THUMPD1Q9NXG2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.85■□□□□ 0.61
THUMPD1Q9NXG2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.85■□□□□ 0.61
THUMPD1Q9NXG2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
THUMPD1Q9NXG2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.85■□□□□ 0.61
THUMPD1Q9NXG2 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
THUMPD1Q9NXG2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
THUMPD1Q9NXG2 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
THUMPD1Q9NXG2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
THUMPD1Q9NXG2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
THUMPD1Q9NXG2 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.84■□□□□ 0.61
THUMPD1Q9NXG2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.84■□□□□ 0.61
THUMPD1Q9NXG2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
THUMPD1Q9NXG2 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
THUMPD1Q9NXG2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.84■□□□□ 0.61
THUMPD1Q9NXG2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
THUMPD1Q9NXG2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.84■□□□□ 0.61
THUMPD1Q9NXG2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
THUMPD1Q9NXG2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.84■□□□□ 0.61
THUMPD1Q9NXG2 AC013268.1-206ENST00000638368 961 ntBASIC18.84■□□□□ 0.61
THUMPD1Q9NXG2 AC112229.1-201ENST00000639295 961 ntBASIC18.84■□□□□ 0.61
THUMPD1Q9NXG2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
THUMPD1Q9NXG2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
THUMPD1Q9NXG2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
THUMPD1Q9NXG2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.84■□□□□ 0.61
THUMPD1Q9NXG2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
THUMPD1Q9NXG2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
THUMPD1Q9NXG2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
THUMPD1Q9NXG2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
THUMPD1Q9NXG2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
THUMPD1Q9NXG2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
THUMPD1Q9NXG2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
THUMPD1Q9NXG2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
THUMPD1Q9NXG2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.84■□□□□ 0.61
THUMPD1Q9NXG2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.83■□□□□ 0.61
THUMPD1Q9NXG2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
THUMPD1Q9NXG2 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
THUMPD1Q9NXG2 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
THUMPD1Q9NXG2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
THUMPD1Q9NXG2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
THUMPD1Q9NXG2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
THUMPD1Q9NXG2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
THUMPD1Q9NXG2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
THUMPD1Q9NXG2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.83■□□□□ 0.6
THUMPD1Q9NXG2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
THUMPD1Q9NXG2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
THUMPD1Q9NXG2 KRT18P61-201ENST00000585825 1298 ntBASIC18.83■□□□□ 0.6
THUMPD1Q9NXG2 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.83■□□□□ 0.6
THUMPD1Q9NXG2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
THUMPD1Q9NXG2 AC125437.2-201ENST00000625180 2167 ntBASIC18.83■□□□□ 0.6
THUMPD1Q9NXG2 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.83■□□□□ 0.6
THUMPD1Q9NXG2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
THUMPD1Q9NXG2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
THUMPD1Q9NXG2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.83■□□□□ 0.6
THUMPD1Q9NXG2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.82■□□□□ 0.6
THUMPD1Q9NXG2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.82■□□□□ 0.6
THUMPD1Q9NXG2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
THUMPD1Q9NXG2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.82■□□□□ 0.6
THUMPD1Q9NXG2 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
THUMPD1Q9NXG2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
THUMPD1Q9NXG2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
THUMPD1Q9NXG2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.82■□□□□ 0.6
THUMPD1Q9NXG2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.82■□□□□ 0.6
THUMPD1Q9NXG2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.82■□□□□ 0.6
THUMPD1Q9NXG2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
THUMPD1Q9NXG2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
THUMPD1Q9NXG2 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
THUMPD1Q9NXG2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
THUMPD1Q9NXG2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.82■□□□□ 0.6
THUMPD1Q9NXG2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
THUMPD1Q9NXG2 AL020996.1-203ENST00000536896 2307 ntBASIC18.82■□□□□ 0.6
THUMPD1Q9NXG2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD1Q9NXG2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD1Q9NXG2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD1Q9NXG2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
THUMPD1Q9NXG2 AC018445.3-201ENST00000624177 1945 ntBASIC18.81■□□□□ 0.6
THUMPD1Q9NXG2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD1Q9NXG2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD1Q9NXG2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD1Q9NXG2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD1Q9NXG2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD1Q9NXG2 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.81■□□□□ 0.6
THUMPD1Q9NXG2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
THUMPD1Q9NXG2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
THUMPD1Q9NXG2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
THUMPD1Q9NXG2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD1Q9NXG2 AL158211.5-201ENST00000623583 2518 ntBASIC18.81■□□□□ 0.6
THUMPD1Q9NXG2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.81■□□□□ 0.6
THUMPD1Q9NXG2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.81■□□□□ 0.6
THUMPD1Q9NXG2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.81■□□□□ 0.6
THUMPD1Q9NXG2 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD1Q9NXG2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD1Q9NXG2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD1Q9NXG2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD1Q9NXG2 BX119927.1-201ENST00000636596 1552 ntBASIC18.81■□□□□ 0.6
THUMPD1Q9NXG2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms