Protein–RNA interactions for Protein: Q9NR23

GDF3, Growth/differentiation factor 3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3Q9NR23 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
GDF3Q9NR23 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
GDF3Q9NR23 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.14■□□□□ 0.98
GDF3Q9NR23 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
GDF3Q9NR23 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.14■□□□□ 0.97
GDF3Q9NR23 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GDF3Q9NR23 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
GDF3Q9NR23 ABHD17AP1-201ENST00000358206 933 ntBASIC21.14■□□□□ 0.97
GDF3Q9NR23 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
GDF3Q9NR23 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GDF3Q9NR23 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.14■□□□□ 0.97
GDF3Q9NR23 TSPY6P-201ENST00000448518 926 ntBASIC21.14■□□□□ 0.97
GDF3Q9NR23 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
GDF3Q9NR23 AC142086.2-201ENST00000569753 217 ntBASIC21.14■□□□□ 0.97
GDF3Q9NR23 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.14■□□□□ 0.97
GDF3Q9NR23 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.14■□□□□ 0.97
GDF3Q9NR23 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
GDF3Q9NR23 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
GDF3Q9NR23 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.14■□□□□ 0.97
GDF3Q9NR23 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GDF3Q9NR23 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
GDF3Q9NR23 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
GDF3Q9NR23 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
GDF3Q9NR23 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GDF3Q9NR23 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GDF3Q9NR23 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.13■□□□□ 0.97
GDF3Q9NR23 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GDF3Q9NR23 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
GDF3Q9NR23 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.13■□□□□ 0.97
GDF3Q9NR23 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.13■□□□□ 0.97
GDF3Q9NR23 AC010141.2-201ENST00000452426 721 ntBASIC21.13■□□□□ 0.97
GDF3Q9NR23 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.13■□□□□ 0.97
GDF3Q9NR23 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.13■□□□□ 0.97
GDF3Q9NR23 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
GDF3Q9NR23 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
GDF3Q9NR23 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GDF3Q9NR23 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
GDF3Q9NR23 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GDF3Q9NR23 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GDF3Q9NR23 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.13■□□□□ 0.97
GDF3Q9NR23 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
GDF3Q9NR23 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GDF3Q9NR23 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GDF3Q9NR23 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GDF3Q9NR23 SLC29A4P1-201ENST00000398760 971 ntBASIC21.12■□□□□ 0.97
GDF3Q9NR23 CD99P1-205ENST00000527459 561 ntBASIC21.12■□□□□ 0.97
GDF3Q9NR23 KRT18P20-201ENST00000548986 1279 ntBASIC21.12■□□□□ 0.97
GDF3Q9NR23 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.12■□□□□ 0.97
GDF3Q9NR23 AC138907.5-202ENST00000569484 235 ntBASIC21.12■□□□□ 0.97
GDF3Q9NR23 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.12■□□□□ 0.97
GDF3Q9NR23 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
GDF3Q9NR23 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
GDF3Q9NR23 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GDF3Q9NR23 AC005332.7-201ENST00000614046 2005 ntBASIC21.12■□□□□ 0.97
GDF3Q9NR23 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
GDF3Q9NR23 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
GDF3Q9NR23 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.12■□□□□ 0.97
GDF3Q9NR23 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
GDF3Q9NR23 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
GDF3Q9NR23 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GDF3Q9NR23 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.11■□□□□ 0.97
GDF3Q9NR23 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
GDF3Q9NR23 AC061975.6-201ENST00000579045 1553 ntBASIC21.11■□□□□ 0.97
GDF3Q9NR23 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GDF3Q9NR23 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
GDF3Q9NR23 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GDF3Q9NR23 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.11■□□□□ 0.97
GDF3Q9NR23 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.11■□□□□ 0.97
GDF3Q9NR23 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
GDF3Q9NR23 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.11■□□□□ 0.97
GDF3Q9NR23 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GDF3Q9NR23 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
GDF3Q9NR23 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
GDF3Q9NR23 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.11■□□□□ 0.97
GDF3Q9NR23 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GDF3Q9NR23 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
GDF3Q9NR23 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
GDF3Q9NR23 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GDF3Q9NR23 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GDF3Q9NR23 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GDF3Q9NR23 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.1■□□□□ 0.97
GDF3Q9NR23 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
GDF3Q9NR23 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.1■□□□□ 0.97
GDF3Q9NR23 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GDF3Q9NR23 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.1■□□□□ 0.97
GDF3Q9NR23 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.1■□□□□ 0.97
GDF3Q9NR23 SLC7A5P2-201ENST00000553010 536 ntBASIC21.1■□□□□ 0.97
GDF3Q9NR23 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.1■□□□□ 0.97
GDF3Q9NR23 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.1■□□□□ 0.97
GDF3Q9NR23 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
GDF3Q9NR23 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.1■□□□□ 0.97
GDF3Q9NR23 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
GDF3Q9NR23 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GDF3Q9NR23 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
GDF3Q9NR23 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GDF3Q9NR23 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GDF3Q9NR23 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
GDF3Q9NR23 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.09■□□□□ 0.97
GDF3Q9NR23 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.09■□□□□ 0.97
GDF3Q9NR23 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms