Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C12orf4Q9NQ89 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C12orf4Q9NQ89 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
C12orf4Q9NQ89 PBX2P1-201ENST00000493219 1291 ntBASIC17.36■□□□□ 0.37
C12orf4Q9NQ89 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C12orf4Q9NQ89 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.36■□□□□ 0.37
C12orf4Q9NQ89 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C12orf4Q9NQ89 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C12orf4Q9NQ89 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C12orf4Q9NQ89 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.36■□□□□ 0.37
C12orf4Q9NQ89 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C12orf4Q9NQ89 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
C12orf4Q9NQ89 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.36■□□□□ 0.37
C12orf4Q9NQ89 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.36■□□□□ 0.37
C12orf4Q9NQ89 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C12orf4Q9NQ89 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.35■□□□□ 0.37
C12orf4Q9NQ89 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.35■□□□□ 0.37
C12orf4Q9NQ89 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
C12orf4Q9NQ89 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
C12orf4Q9NQ89 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
C12orf4Q9NQ89 AC096631.2-201ENST00000436136 790 ntBASIC17.35■□□□□ 0.37
C12orf4Q9NQ89 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.35■□□□□ 0.37
C12orf4Q9NQ89 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.35■□□□□ 0.37
C12orf4Q9NQ89 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.35■□□□□ 0.37
C12orf4Q9NQ89 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.35■□□□□ 0.37
C12orf4Q9NQ89 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.35■□□□□ 0.37
C12orf4Q9NQ89 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
C12orf4Q9NQ89 AC106739.1-201ENST00000617035 715 ntBASIC17.35■□□□□ 0.37
C12orf4Q9NQ89 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C12orf4Q9NQ89 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C12orf4Q9NQ89 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
C12orf4Q9NQ89 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.35■□□□□ 0.37
C12orf4Q9NQ89 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
C12orf4Q9NQ89 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C12orf4Q9NQ89 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.35■□□□□ 0.37
C12orf4Q9NQ89 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C12orf4Q9NQ89 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
C12orf4Q9NQ89 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
C12orf4Q9NQ89 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
C12orf4Q9NQ89 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
C12orf4Q9NQ89 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
C12orf4Q9NQ89 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
C12orf4Q9NQ89 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.35■□□□□ 0.37
C12orf4Q9NQ89 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
C12orf4Q9NQ89 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
C12orf4Q9NQ89 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.34■□□□□ 0.37
C12orf4Q9NQ89 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C12orf4Q9NQ89 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
C12orf4Q9NQ89 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C12orf4Q9NQ89 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C12orf4Q9NQ89 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C12orf4Q9NQ89 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C12orf4Q9NQ89 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C12orf4Q9NQ89 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
C12orf4Q9NQ89 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
C12orf4Q9NQ89 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
C12orf4Q9NQ89 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.34■□□□□ 0.37
C12orf4Q9NQ89 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.34■□□□□ 0.37
C12orf4Q9NQ89 RASA4CP-201ENST00000424092 1398 ntBASIC17.34■□□□□ 0.37
C12orf4Q9NQ89 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
C12orf4Q9NQ89 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C12orf4Q9NQ89 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.34■□□□□ 0.37
C12orf4Q9NQ89 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.34■□□□□ 0.37
C12orf4Q9NQ89 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
C12orf4Q9NQ89 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C12orf4Q9NQ89 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C12orf4Q9NQ89 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C12orf4Q9NQ89 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C12orf4Q9NQ89 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C12orf4Q9NQ89 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
C12orf4Q9NQ89 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
C12orf4Q9NQ89 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.33■□□□□ 0.37
C12orf4Q9NQ89 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
C12orf4Q9NQ89 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
C12orf4Q9NQ89 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
C12orf4Q9NQ89 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
C12orf4Q9NQ89 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
C12orf4Q9NQ89 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
C12orf4Q9NQ89 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
C12orf4Q9NQ89 AC008406.3-201ENST00000620001 1374 ntBASIC17.33■□□□□ 0.36
C12orf4Q9NQ89 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.33■□□□□ 0.36
C12orf4Q9NQ89 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C12orf4Q9NQ89 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.33■□□□□ 0.36
C12orf4Q9NQ89 AC091305.1-201ENST00000479476 895 ntBASIC17.33■□□□□ 0.36
C12orf4Q9NQ89 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.33■□□□□ 0.36
C12orf4Q9NQ89 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C12orf4Q9NQ89 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
C12orf4Q9NQ89 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
C12orf4Q9NQ89 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C12orf4Q9NQ89 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
C12orf4Q9NQ89 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C12orf4Q9NQ89 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C12orf4Q9NQ89 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
C12orf4Q9NQ89 NEFHP1-201ENST00000412845 2629 ntBASIC17.33■□□□□ 0.36
C12orf4Q9NQ89 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C12orf4Q9NQ89 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.32■□□□□ 0.36
C12orf4Q9NQ89 AC061975.6-201ENST00000579045 1553 ntBASIC17.32■□□□□ 0.36
C12orf4Q9NQ89 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
C12orf4Q9NQ89 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C12orf4Q9NQ89 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms