Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SLC52A3Q9NQ40 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC52A3Q9NQ40 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.02■□□□□ 0.64
SLC52A3Q9NQ40 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.02■□□□□ 0.63
SLC52A3Q9NQ40 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.63
SLC52A3Q9NQ40 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
SLC52A3Q9NQ40 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.02■□□□□ 0.63
SLC52A3Q9NQ40 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SLC52A3Q9NQ40 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SLC52A3Q9NQ40 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.02■□□□□ 0.63
SLC52A3Q9NQ40 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC52A3Q9NQ40 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC52A3Q9NQ40 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.01■□□□□ 0.63
SLC52A3Q9NQ40 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC52A3Q9NQ40 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC52A3Q9NQ40 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC52A3Q9NQ40 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.01■□□□□ 0.63
SLC52A3Q9NQ40 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC52A3Q9NQ40 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.01■□□□□ 0.63
SLC52A3Q9NQ40 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.01■□□□□ 0.63
SLC52A3Q9NQ40 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC52A3Q9NQ40 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SLC52A3Q9NQ40 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.01■□□□□ 0.63
SLC52A3Q9NQ40 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.01■□□□□ 0.63
SLC52A3Q9NQ40 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC52A3Q9NQ40 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC52A3Q9NQ40 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC52A3Q9NQ40 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC52A3Q9NQ40 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC52A3Q9NQ40 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SLC52A3Q9NQ40 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC52A3Q9NQ40 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC52A3Q9NQ40 CYP21A1P-202ENST00000354927 1481 ntBASIC19.01■□□□□ 0.63
SLC52A3Q9NQ40 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.01■□□□□ 0.63
SLC52A3Q9NQ40 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC52A3Q9NQ40 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC52A3Q9NQ40 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC52A3Q9NQ40 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC52A3Q9NQ40 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC52A3Q9NQ40 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC52A3Q9NQ40 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19■□□□□ 0.63
SLC52A3Q9NQ40 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19■□□□□ 0.63
SLC52A3Q9NQ40 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SLC52A3Q9NQ40 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19■□□□□ 0.63
SLC52A3Q9NQ40 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC52A3Q9NQ40 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC52A3Q9NQ40 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19■□□□□ 0.63
SLC52A3Q9NQ40 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19■□□□□ 0.63
SLC52A3Q9NQ40 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19■□□□□ 0.63
SLC52A3Q9NQ40 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC52A3Q9NQ40 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19■□□□□ 0.63
SLC52A3Q9NQ40 UBE2DNL-204ENST00000602536 740 ntBASIC19■□□□□ 0.63
SLC52A3Q9NQ40 SP2-202ENST00000613139 908 ntTSL 5 BASIC19■□□□□ 0.63
SLC52A3Q9NQ40 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19■□□□□ 0.63
SLC52A3Q9NQ40 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
SLC52A3Q9NQ40 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
SLC52A3Q9NQ40 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SLC52A3Q9NQ40 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC52A3Q9NQ40 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
SLC52A3Q9NQ40 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19■□□□□ 0.63
SLC52A3Q9NQ40 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC52A3Q9NQ40 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC52A3Q9NQ40 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19■□□□□ 0.63
SLC52A3Q9NQ40 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SLC52A3Q9NQ40 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC52A3Q9NQ40 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC52A3Q9NQ40 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC52A3Q9NQ40 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC52A3Q9NQ40 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC52A3Q9NQ40 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SLC52A3Q9NQ40 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.99■□□□□ 0.63
SLC52A3Q9NQ40 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC52A3Q9NQ40 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC52A3Q9NQ40 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC52A3Q9NQ40 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC52A3Q9NQ40 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC52A3Q9NQ40 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC52A3Q9NQ40 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.99■□□□□ 0.63
SLC52A3Q9NQ40 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.99■□□□□ 0.63
SLC52A3Q9NQ40 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC52A3Q9NQ40 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC52A3Q9NQ40 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC52A3Q9NQ40 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC52A3Q9NQ40 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC52A3Q9NQ40 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.99■□□□□ 0.63
SLC52A3Q9NQ40 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC52A3Q9NQ40 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SLC52A3Q9NQ40 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.99■□□□□ 0.63
SLC52A3Q9NQ40 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC52A3Q9NQ40 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC52A3Q9NQ40 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC52A3Q9NQ40 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SLC52A3Q9NQ40 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC52A3Q9NQ40 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC52A3Q9NQ40 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC52A3Q9NQ40 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC52A3Q9NQ40 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC52A3Q9NQ40 PGM5P4-201ENST00000421970 445 ntBASIC18.98■□□□□ 0.63
SLC52A3Q9NQ40 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC52A3Q9NQ40 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms