Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLK4Q9HAZ1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLK4Q9HAZ1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.47■□□□□ 0.71
CLK4Q9HAZ1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLK4Q9HAZ1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.47■□□□□ 0.71
CLK4Q9HAZ1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLK4Q9HAZ1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLK4Q9HAZ1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
CLK4Q9HAZ1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLK4Q9HAZ1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLK4Q9HAZ1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLK4Q9HAZ1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.47■□□□□ 0.71
CLK4Q9HAZ1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.47■□□□□ 0.71
CLK4Q9HAZ1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLK4Q9HAZ1 AC016405.3-201ENST00000607710 860 ntBASIC19.47■□□□□ 0.71
CLK4Q9HAZ1 AL050303.2-201ENST00000619798 666 ntBASIC19.47■□□□□ 0.71
CLK4Q9HAZ1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLK4Q9HAZ1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLK4Q9HAZ1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLK4Q9HAZ1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CLK4Q9HAZ1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CLK4Q9HAZ1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.47■□□□□ 0.71
CLK4Q9HAZ1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLK4Q9HAZ1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
CLK4Q9HAZ1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLK4Q9HAZ1 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CLK4Q9HAZ1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.46■□□□□ 0.71
CLK4Q9HAZ1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CLK4Q9HAZ1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLK4Q9HAZ1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLK4Q9HAZ1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.46■□□□□ 0.71
CLK4Q9HAZ1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLK4Q9HAZ1 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLK4Q9HAZ1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLK4Q9HAZ1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLK4Q9HAZ1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLK4Q9HAZ1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLK4Q9HAZ1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLK4Q9HAZ1 GPX1P1-201ENST00000388829 606 ntBASIC19.46■□□□□ 0.71
CLK4Q9HAZ1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CLK4Q9HAZ1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.46■□□□□ 0.71
CLK4Q9HAZ1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.46■□□□□ 0.71
CLK4Q9HAZ1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CLK4Q9HAZ1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLK4Q9HAZ1 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLK4Q9HAZ1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLK4Q9HAZ1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLK4Q9HAZ1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.46■□□□□ 0.71
CLK4Q9HAZ1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLK4Q9HAZ1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLK4Q9HAZ1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLK4Q9HAZ1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLK4Q9HAZ1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLK4Q9HAZ1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CLK4Q9HAZ1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLK4Q9HAZ1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLK4Q9HAZ1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLK4Q9HAZ1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
CLK4Q9HAZ1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.45■□□□□ 0.7
CLK4Q9HAZ1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLK4Q9HAZ1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLK4Q9HAZ1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.45■□□□□ 0.7
CLK4Q9HAZ1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.45■□□□□ 0.7
CLK4Q9HAZ1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
CLK4Q9HAZ1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.45■□□□□ 0.7
CLK4Q9HAZ1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLK4Q9HAZ1 PGM5P4-201ENST00000421970 445 ntBASIC19.45■□□□□ 0.7
CLK4Q9HAZ1 AC083906.2-201ENST00000511578 360 ntBASIC19.45■□□□□ 0.7
CLK4Q9HAZ1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.45■□□□□ 0.7
CLK4Q9HAZ1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLK4Q9HAZ1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CLK4Q9HAZ1 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLK4Q9HAZ1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CLK4Q9HAZ1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLK4Q9HAZ1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLK4Q9HAZ1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLK4Q9HAZ1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
CLK4Q9HAZ1 AC121338.2-201ENST00000622535 1744 ntBASIC19.45■□□□□ 0.7
CLK4Q9HAZ1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
CLK4Q9HAZ1 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.45■□□□□ 0.7
CLK4Q9HAZ1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.45■□□□□ 0.7
CLK4Q9HAZ1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLK4Q9HAZ1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.44■□□□□ 0.7
CLK4Q9HAZ1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLK4Q9HAZ1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLK4Q9HAZ1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLK4Q9HAZ1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.44■□□□□ 0.7
CLK4Q9HAZ1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.44■□□□□ 0.7
CLK4Q9HAZ1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLK4Q9HAZ1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLK4Q9HAZ1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.44■□□□□ 0.7
CLK4Q9HAZ1 MCRIP2P1-201ENST00000394346 511 ntBASIC19.44■□□□□ 0.7
CLK4Q9HAZ1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.44■□□□□ 0.7
CLK4Q9HAZ1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.44■□□□□ 0.7
CLK4Q9HAZ1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLK4Q9HAZ1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.44■□□□□ 0.7
CLK4Q9HAZ1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.44■□□□□ 0.7
CLK4Q9HAZ1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLK4Q9HAZ1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLK4Q9HAZ1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms