Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CCDC68Q9H2F9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC68Q9H2F9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CCDC68Q9H2F9 AL391422.3-201ENST00000603791 2761 ntBASIC20.09■□□□□ 0.81
CCDC68Q9H2F9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC68Q9H2F9 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC68Q9H2F9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC68Q9H2F9 MCRIP2P1-201ENST00000394346 511 ntBASIC20.09■□□□□ 0.81
CCDC68Q9H2F9 MIR935-201ENST00000401179 91 ntBASIC20.09■□□□□ 0.81
CCDC68Q9H2F9 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC68Q9H2F9 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC68Q9H2F9 SMG8-203ENST00000578922 2178 ntBASIC20.09■□□□□ 0.81
CCDC68Q9H2F9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC68Q9H2F9 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC68Q9H2F9 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC68Q9H2F9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC68Q9H2F9 DPP3P2-201ENST00000416030 1696 ntBASIC20.09■□□□□ 0.81
CCDC68Q9H2F9 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
CCDC68Q9H2F9 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC68Q9H2F9 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC68Q9H2F9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC68Q9H2F9 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC68Q9H2F9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC68Q9H2F9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC68Q9H2F9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC68Q9H2F9 AC007952.6-201ENST00000573168 2673 ntBASIC20.08■□□□□ 0.81
CCDC68Q9H2F9 AC003957.1-201ENST00000625108 2673 ntBASIC20.08■□□□□ 0.81
CCDC68Q9H2F9 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CCDC68Q9H2F9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC68Q9H2F9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC68Q9H2F9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC68Q9H2F9 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC68Q9H2F9 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC68Q9H2F9 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC68Q9H2F9 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC68Q9H2F9 AC100791.3-201ENST00000617619 330 ntBASIC20.08■□□□□ 0.81
CCDC68Q9H2F9 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CCDC68Q9H2F9 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC68Q9H2F9 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC68Q9H2F9 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.08■□□□□ 0.8
CCDC68Q9H2F9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC68Q9H2F9 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC68Q9H2F9 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC68Q9H2F9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC68Q9H2F9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC68Q9H2F9 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CCDC68Q9H2F9 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC68Q9H2F9 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC68Q9H2F9 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.07■□□□□ 0.8
CCDC68Q9H2F9 CYP2T1P-201ENST00000432607 1285 ntBASIC20.07■□□□□ 0.8
CCDC68Q9H2F9 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.07■□□□□ 0.8
CCDC68Q9H2F9 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC68Q9H2F9 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC68Q9H2F9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC68Q9H2F9 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC68Q9H2F9 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC68Q9H2F9 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC68Q9H2F9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC68Q9H2F9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC68Q9H2F9 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC68Q9H2F9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.06■□□□□ 0.8
CCDC68Q9H2F9 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CCDC68Q9H2F9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC68Q9H2F9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.06■□□□□ 0.8
CCDC68Q9H2F9 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC68Q9H2F9 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
CCDC68Q9H2F9 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC68Q9H2F9 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC68Q9H2F9 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC68Q9H2F9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC68Q9H2F9 AC099778.1-201ENST00000568593 1911 ntBASIC20.06■□□□□ 0.8
CCDC68Q9H2F9 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC68Q9H2F9 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC68Q9H2F9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC68Q9H2F9 PCDHAC2-203ENST00000615316 3011 ntBASIC20.05■□□□□ 0.8
CCDC68Q9H2F9 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC68Q9H2F9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC68Q9H2F9 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC68Q9H2F9 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC68Q9H2F9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC68Q9H2F9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC68Q9H2F9 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC68Q9H2F9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CCDC68Q9H2F9 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC68Q9H2F9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC68Q9H2F9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CCDC68Q9H2F9 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
CCDC68Q9H2F9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC68Q9H2F9 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC68Q9H2F9 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC68Q9H2F9 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC68Q9H2F9 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CCDC68Q9H2F9 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC68Q9H2F9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC68Q9H2F9 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC68Q9H2F9 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC68Q9H2F9 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC68Q9H2F9 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC68Q9H2F9 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC68Q9H2F9 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms