Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CYSTM1Q9H1C7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CYSTM1Q9H1C7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
CYSTM1Q9H1C7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 LINC01960-201ENST00000563759 1884 ntBASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 AD000864.1-201ENST00000624076 2295 ntBASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 AC008741.2-201ENST00000612792 3115 ntBASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CYSTM1Q9H1C7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CYSTM1Q9H1C7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms