Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
NKX6-2Q9C056 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX6-2Q9C056 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.24■□□□□ 0.19
NKX6-2Q9C056 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX6-2Q9C056 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NKX6-2Q9C056 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
NKX6-2Q9C056 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX6-2Q9C056 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-2Q9C056 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-2Q9C056 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-2Q9C056 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-2Q9C056 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-2Q9C056 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NKX6-2Q9C056 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.23■□□□□ 0.19
NKX6-2Q9C056 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-2Q9C056 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.23■□□□□ 0.19
NKX6-2Q9C056 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-2Q9C056 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC16.23■□□□□ 0.19
NKX6-2Q9C056 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-2Q9C056 NTF6A-201ENST00000591175 560 ntBASIC16.23■□□□□ 0.19
NKX6-2Q9C056 AC087239.1-201ENST00000622671 572 ntBASIC16.23■□□□□ 0.19
NKX6-2Q9C056 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-2Q9C056 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-2Q9C056 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-2Q9C056 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-2Q9C056 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-2Q9C056 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-2Q9C056 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-2Q9C056 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-2Q9C056 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
NKX6-2Q9C056 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-2Q9C056 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-2Q9C056 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
NKX6-2Q9C056 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-2Q9C056 Z82202.1-201ENST00000623446 1880 ntBASIC16.22■□□□□ 0.19
NKX6-2Q9C056 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-2Q9C056 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
NKX6-2Q9C056 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-2Q9C056 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-2Q9C056 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-2Q9C056 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-2Q9C056 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-2Q9C056 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-2Q9C056 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-2Q9C056 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
NKX6-2Q9C056 AC135050.7-201ENST00000624508 2218 ntBASIC16.22■□□□□ 0.19
NKX6-2Q9C056 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NKX6-2Q9C056 ATP5G2P3-201ENST00000429083 425 ntBASIC16.22■□□□□ 0.19
NKX6-2Q9C056 CLTA-206ENST00000466396 695 ntTSL 2 BASIC16.22■□□□□ 0.19
NKX6-2Q9C056 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-2Q9C056 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-2Q9C056 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-2Q9C056 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC16.22■□□□□ 0.19
NKX6-2Q9C056 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
NKX6-2Q9C056 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
NKX6-2Q9C056 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
NKX6-2Q9C056 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-2Q9C056 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.22■□□□□ 0.19
NKX6-2Q9C056 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-2Q9C056 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-2Q9C056 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-2Q9C056 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-2Q9C056 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-2Q9C056 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NKX6-2Q9C056 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-2Q9C056 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
NKX6-2Q9C056 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-2Q9C056 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.21■□□□□ 0.19
NKX6-2Q9C056 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
NKX6-2Q9C056 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
NKX6-2Q9C056 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX6-2Q9C056 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
NKX6-2Q9C056 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
NKX6-2Q9C056 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
NKX6-2Q9C056 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX6-2Q9C056 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX6-2Q9C056 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
NKX6-2Q9C056 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.21■□□□□ 0.19
NKX6-2Q9C056 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX6-2Q9C056 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NKX6-2Q9C056 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
NKX6-2Q9C056 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.21■□□□□ 0.19
NKX6-2Q9C056 AC021242.3-201ENST00000607598 1377 ntBASIC16.21■□□□□ 0.19
NKX6-2Q9C056 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NKX6-2Q9C056 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.21■□□□□ 0.19
NKX6-2Q9C056 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX6-2Q9C056 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
NKX6-2Q9C056 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NKX6-2Q9C056 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC16.21■□□□□ 0.19
NKX6-2Q9C056 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NKX6-2Q9C056 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NKX6-2Q9C056 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX6-2Q9C056 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NKX6-2Q9C056 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
NKX6-2Q9C056 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
NKX6-2Q9C056 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
NKX6-2Q9C056 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-2Q9C056 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-2Q9C056 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.2■□□□□ 0.18
NKX6-2Q9C056 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms