Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.75■□□□□ 0.75
CCM2Q9BSQ5 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCM2Q9BSQ5 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCM2Q9BSQ5 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCM2Q9BSQ5 KRT8P17-201ENST00000453110 1448 ntBASIC19.75■□□□□ 0.75
CCM2Q9BSQ5 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.75■□□□□ 0.75
CCM2Q9BSQ5 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCM2Q9BSQ5 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCM2Q9BSQ5 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCM2Q9BSQ5 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.74■□□□□ 0.75
CCM2Q9BSQ5 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.74■□□□□ 0.75
CCM2Q9BSQ5 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.74■□□□□ 0.75
CCM2Q9BSQ5 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCM2Q9BSQ5 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCM2Q9BSQ5 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCM2Q9BSQ5 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.74■□□□□ 0.75
CCM2Q9BSQ5 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCM2Q9BSQ5 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCM2Q9BSQ5 HLA-G-202ENST00000376815 851 ntBASIC19.74■□□□□ 0.75
CCM2Q9BSQ5 HLA-G-203ENST00000376818 1127 ntBASIC19.74■□□□□ 0.75
CCM2Q9BSQ5 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.74■□□□□ 0.75
CCM2Q9BSQ5 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.74■□□□□ 0.75
CCM2Q9BSQ5 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCM2Q9BSQ5 RNA5SP413-201ENST00000516373 109 ntBASIC19.74■□□□□ 0.75
CCM2Q9BSQ5 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.74■□□□□ 0.75
CCM2Q9BSQ5 AL031963.3-201ENST00000606441 850 ntBASIC19.74■□□□□ 0.75
CCM2Q9BSQ5 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCM2Q9BSQ5 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CCM2Q9BSQ5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.74■□□□□ 0.75
CCM2Q9BSQ5 AL162377.1-201ENST00000618844 1793 ntBASIC19.74■□□□□ 0.75
CCM2Q9BSQ5 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CCM2Q9BSQ5 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.74■□□□□ 0.75
CCM2Q9BSQ5 KRT8P20-201ENST00000423953 1409 ntBASIC19.74■□□□□ 0.75
CCM2Q9BSQ5 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCM2Q9BSQ5 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.74■□□□□ 0.75
CCM2Q9BSQ5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCM2Q9BSQ5 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.74■□□□□ 0.75
CCM2Q9BSQ5 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCM2Q9BSQ5 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCM2Q9BSQ5 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCM2Q9BSQ5 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCM2Q9BSQ5 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCM2Q9BSQ5 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CCM2Q9BSQ5 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCM2Q9BSQ5 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.73■□□□□ 0.75
CCM2Q9BSQ5 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.73■□□□□ 0.75
CCM2Q9BSQ5 AL390719.1-204ENST00000412397 1219 ntBASIC19.73■□□□□ 0.75
CCM2Q9BSQ5 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CCM2Q9BSQ5 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCM2Q9BSQ5 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCM2Q9BSQ5 AC005829.2-201ENST00000571422 1056 ntBASIC19.73■□□□□ 0.75
CCM2Q9BSQ5 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.73■□□□□ 0.75
CCM2Q9BSQ5 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCM2Q9BSQ5 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCM2Q9BSQ5 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.73■□□□□ 0.75
CCM2Q9BSQ5 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.73■□□□□ 0.75
CCM2Q9BSQ5 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCM2Q9BSQ5 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.73■□□□□ 0.75
CCM2Q9BSQ5 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCM2Q9BSQ5 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCM2Q9BSQ5 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCM2Q9BSQ5 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCM2Q9BSQ5 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCM2Q9BSQ5 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.72■□□□□ 0.75
CCM2Q9BSQ5 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCM2Q9BSQ5 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCM2Q9BSQ5 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCM2Q9BSQ5 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCM2Q9BSQ5 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCM2Q9BSQ5 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CCM2Q9BSQ5 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCM2Q9BSQ5 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.72■□□□□ 0.75
CCM2Q9BSQ5 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.72■□□□□ 0.75
CCM2Q9BSQ5 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.72■□□□□ 0.75
CCM2Q9BSQ5 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.72■□□□□ 0.75
CCM2Q9BSQ5 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.72■□□□□ 0.75
CCM2Q9BSQ5 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.72■□□□□ 0.75
CCM2Q9BSQ5 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.72■□□□□ 0.75
CCM2Q9BSQ5 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.72■□□□□ 0.75
CCM2Q9BSQ5 PNMA6B-201ENST00000538162 1200 ntBASIC19.72■□□□□ 0.75
CCM2Q9BSQ5 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.72■□□□□ 0.75
CCM2Q9BSQ5 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCM2Q9BSQ5 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCM2Q9BSQ5 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.72■□□□□ 0.75
CCM2Q9BSQ5 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCM2Q9BSQ5 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCM2Q9BSQ5 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CCM2Q9BSQ5 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCM2Q9BSQ5 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCM2Q9BSQ5 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCM2Q9BSQ5 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCM2Q9BSQ5 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.71■□□□□ 0.75
CCM2Q9BSQ5 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCM2Q9BSQ5 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.71■□□□□ 0.75
CCM2Q9BSQ5 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCM2Q9BSQ5 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCM2Q9BSQ5 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCM2Q9BSQ5 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCM2Q9BSQ5 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.71■□□□□ 0.75
CCM2Q9BSQ5 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms