Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCGF1Q9BSM1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.77■□□□□ 0.28
PCGF1Q9BSM1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
PCGF1Q9BSM1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.77■□□□□ 0.28
PCGF1Q9BSM1 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.77■□□□□ 0.28
PCGF1Q9BSM1 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.77■□□□□ 0.28
PCGF1Q9BSM1 AC011484.1-201ENST00000377652 1995 ntBASIC16.77■□□□□ 0.28
PCGF1Q9BSM1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCGF1Q9BSM1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCGF1Q9BSM1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCGF1Q9BSM1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCGF1Q9BSM1 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
PCGF1Q9BSM1 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCGF1Q9BSM1 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCGF1Q9BSM1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.77■□□□□ 0.28
PCGF1Q9BSM1 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.77■□□□□ 0.28
PCGF1Q9BSM1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.77■□□□□ 0.28
PCGF1Q9BSM1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.77■□□□□ 0.28
PCGF1Q9BSM1 AC105020.6-201ENST00000621523 1217 ntBASIC16.77■□□□□ 0.28
PCGF1Q9BSM1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.77■□□□□ 0.28
PCGF1Q9BSM1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.77■□□□□ 0.28
PCGF1Q9BSM1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCGF1Q9BSM1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCGF1Q9BSM1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCGF1Q9BSM1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCGF1Q9BSM1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCGF1Q9BSM1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCGF1Q9BSM1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCGF1Q9BSM1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
PCGF1Q9BSM1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.77■□□□□ 0.27
PCGF1Q9BSM1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCGF1Q9BSM1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCGF1Q9BSM1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCGF1Q9BSM1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCGF1Q9BSM1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
PCGF1Q9BSM1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCGF1Q9BSM1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCGF1Q9BSM1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.76■□□□□ 0.27
PCGF1Q9BSM1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.76■□□□□ 0.27
PCGF1Q9BSM1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCGF1Q9BSM1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCGF1Q9BSM1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCGF1Q9BSM1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
PCGF1Q9BSM1 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.76■□□□□ 0.27
PCGF1Q9BSM1 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
PCGF1Q9BSM1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.76■□□□□ 0.27
PCGF1Q9BSM1 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCGF1Q9BSM1 TMEM191A-211ENST00000637163 1067 ntBASIC16.76■□□□□ 0.27
PCGF1Q9BSM1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.76■□□□□ 0.27
PCGF1Q9BSM1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.76■□□□□ 0.27
PCGF1Q9BSM1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PCGF1Q9BSM1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCGF1Q9BSM1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PCGF1Q9BSM1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.76■□□□□ 0.27
PCGF1Q9BSM1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PCGF1Q9BSM1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
PCGF1Q9BSM1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCGF1Q9BSM1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.75■□□□□ 0.27
PCGF1Q9BSM1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
PCGF1Q9BSM1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCGF1Q9BSM1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.75■□□□□ 0.27
PCGF1Q9BSM1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCGF1Q9BSM1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.75■□□□□ 0.27
PCGF1Q9BSM1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.75■□□□□ 0.27
PCGF1Q9BSM1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.75■□□□□ 0.27
PCGF1Q9BSM1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PCGF1Q9BSM1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.75■□□□□ 0.27
PCGF1Q9BSM1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCGF1Q9BSM1 AC087633.2-202ENST00000565166 1439 ntBASIC16.75■□□□□ 0.27
PCGF1Q9BSM1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PCGF1Q9BSM1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCGF1Q9BSM1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.75■□□□□ 0.27
PCGF1Q9BSM1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PCGF1Q9BSM1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCGF1Q9BSM1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCGF1Q9BSM1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.75■□□□□ 0.27
PCGF1Q9BSM1 PLK5-205ENST00000642079 1969 ntBASIC16.75■□□□□ 0.27
PCGF1Q9BSM1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCGF1Q9BSM1 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCGF1Q9BSM1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PCGF1Q9BSM1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCGF1Q9BSM1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCGF1Q9BSM1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCGF1Q9BSM1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.74■□□□□ 0.27
PCGF1Q9BSM1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCGF1Q9BSM1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCGF1Q9BSM1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.74■□□□□ 0.27
PCGF1Q9BSM1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PCGF1Q9BSM1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.74■□□□□ 0.27
PCGF1Q9BSM1 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.74■□□□□ 0.27
PCGF1Q9BSM1 POU5F1P3-201ENST00000428824 1078 ntBASIC16.74■□□□□ 0.27
PCGF1Q9BSM1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.74■□□□□ 0.27
PCGF1Q9BSM1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCGF1Q9BSM1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.74■□□□□ 0.27
PCGF1Q9BSM1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.74■□□□□ 0.27
PCGF1Q9BSM1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCGF1Q9BSM1 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCGF1Q9BSM1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCGF1Q9BSM1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.74■□□□□ 0.27
PCGF1Q9BSM1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms