Protein–RNA interactions for Protein: Q99878

HIST1H2AJ, Histone H2A type 1-J, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AJQ99878 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H2AJQ99878 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.69■□□□□ 0.74
HIST1H2AJQ99878 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.69■□□□□ 0.74
HIST1H2AJQ99878 AC105036.2-201ENST00000569468 176 ntBASIC19.69■□□□□ 0.74
HIST1H2AJQ99878 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.69■□□□□ 0.74
HIST1H2AJQ99878 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HIST1H2AJQ99878 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H2AJQ99878 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HIST1H2AJQ99878 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H2AJQ99878 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H2AJQ99878 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.68■□□□□ 0.74
HIST1H2AJQ99878 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HIST1H2AJQ99878 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.68■□□□□ 0.74
HIST1H2AJQ99878 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H2AJQ99878 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.68■□□□□ 0.74
HIST1H2AJQ99878 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H2AJQ99878 MKRN4P-201ENST00000444706 1521 ntBASIC19.68■□□□□ 0.74
HIST1H2AJQ99878 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H2AJQ99878 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H2AJQ99878 LSM12P1-201ENST00000411836 588 ntBASIC19.68■□□□□ 0.74
HIST1H2AJQ99878 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.68■□□□□ 0.74
HIST1H2AJQ99878 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.68■□□□□ 0.74
HIST1H2AJQ99878 AC006970.2-201ENST00000450065 779 ntBASIC19.68■□□□□ 0.74
HIST1H2AJQ99878 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.68■□□□□ 0.74
HIST1H2AJQ99878 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H2AJQ99878 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H2AJQ99878 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H2AJQ99878 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H2AJQ99878 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H2AJQ99878 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.68■□□□□ 0.74
HIST1H2AJQ99878 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H2AJQ99878 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.67■□□□□ 0.74
HIST1H2AJQ99878 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H2AJQ99878 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HIST1H2AJQ99878 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H2AJQ99878 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H2AJQ99878 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H2AJQ99878 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.67■□□□□ 0.74
HIST1H2AJQ99878 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H2AJQ99878 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.67■□□□□ 0.74
HIST1H2AJQ99878 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HIST1H2AJQ99878 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H2AJQ99878 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H2AJQ99878 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H2AJQ99878 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H2AJQ99878 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.67■□□□□ 0.74
HIST1H2AJQ99878 AC099778.1-201ENST00000568593 1911 ntBASIC19.66■□□□□ 0.74
HIST1H2AJQ99878 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
HIST1H2AJQ99878 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
HIST1H2AJQ99878 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H2AJQ99878 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H2AJQ99878 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H2AJQ99878 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HIST1H2AJQ99878 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H2AJQ99878 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HIST1H2AJQ99878 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.66■□□□□ 0.74
HIST1H2AJQ99878 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H2AJQ99878 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.66■□□□□ 0.74
HIST1H2AJQ99878 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.66■□□□□ 0.74
HIST1H2AJQ99878 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.66■□□□□ 0.74
HIST1H2AJQ99878 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.66■□□□□ 0.74
HIST1H2AJQ99878 RAP2CP1-201ENST00000605103 478 ntBASIC19.66■□□□□ 0.74
HIST1H2AJQ99878 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H2AJQ99878 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H2AJQ99878 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.66■□□□□ 0.74
HIST1H2AJQ99878 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.66■□□□□ 0.74
HIST1H2AJQ99878 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.66■□□□□ 0.74
HIST1H2AJQ99878 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.66■□□□□ 0.74
HIST1H2AJQ99878 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIST1H2AJQ99878 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.65■□□□□ 0.74
HIST1H2AJQ99878 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIST1H2AJQ99878 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIST1H2AJQ99878 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.65■□□□□ 0.74
HIST1H2AJQ99878 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HIST1H2AJQ99878 CROCCP5-201ENST00000436658 830 ntBASIC19.65■□□□□ 0.74
HIST1H2AJQ99878 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
HIST1H2AJQ99878 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.65■□□□□ 0.74
HIST1H2AJQ99878 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.65■□□□□ 0.74
HIST1H2AJQ99878 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.65■□□□□ 0.74
HIST1H2AJQ99878 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.65■□□□□ 0.74
HIST1H2AJQ99878 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.65■□□□□ 0.74
HIST1H2AJQ99878 AL050303.2-201ENST00000619798 666 ntBASIC19.65■□□□□ 0.74
HIST1H2AJQ99878 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HIST1H2AJQ99878 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
HIST1H2AJQ99878 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.65■□□□□ 0.74
HIST1H2AJQ99878 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.65■□□□□ 0.74
HIST1H2AJQ99878 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIST1H2AJQ99878 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.65■□□□□ 0.74
HIST1H2AJQ99878 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HIST1H2AJQ99878 AL391422.3-201ENST00000603791 2761 ntBASIC19.65■□□□□ 0.74
HIST1H2AJQ99878 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIST1H2AJQ99878 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
HIST1H2AJQ99878 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIST1H2AJQ99878 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIST1H2AJQ99878 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HIST1H2AJQ99878 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
HIST1H2AJQ99878 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
HIST1H2AJQ99878 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HIST1H2AJQ99878 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HIST1H2AJQ99878 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms