Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV9Q99603 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV9Q99603 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV9Q99603 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC15.64■□□□□ 0.09
TRGV9Q99603 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC15.64■□□□□ 0.09
TRGV9Q99603 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV9Q99603 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC15.64■□□□□ 0.09
TRGV9Q99603 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV9Q99603 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV9Q99603 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV9Q99603 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV9Q99603 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV9Q99603 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV9Q99603 CASP6-205ENST00000505486 538 ntTSL 4 BASIC15.64■□□□□ 0.09
TRGV9Q99603 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC15.64■□□□□ 0.09
TRGV9Q99603 GALNS-213ENST00000569433 723 ntTSL 3 BASIC15.64■□□□□ 0.09
TRGV9Q99603 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC15.64■□□□□ 0.09
TRGV9Q99603 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV9Q99603 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC15.64■□□□□ 0.09
TRGV9Q99603 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.64■□□□□ 0.09
TRGV9Q99603 MYCNOS-205ENST00000641950 531 ntBASIC15.64■□□□□ 0.09
TRGV9Q99603 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV9Q99603 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV9Q99603 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV9Q99603 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC15.64■□□□□ 0.09
TRGV9Q99603 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.64■□□□□ 0.09
TRGV9Q99603 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV9Q99603 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV9Q99603 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV9Q99603 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.63■□□□□ 0.09
TRGV9Q99603 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
TRGV9Q99603 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC15.63■□□□□ 0.09
TRGV9Q99603 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRGV9Q99603 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV9Q99603 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV9Q99603 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC15.63■□□□□ 0.09
TRGV9Q99603 MIR638-201ENST00000385237 100 ntBASIC15.63■□□□□ 0.09
TRGV9Q99603 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC15.63■□□□□ 0.09
TRGV9Q99603 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC15.63■□□□□ 0.09
TRGV9Q99603 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRGV9Q99603 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC15.63■□□□□ 0.09
TRGV9Q99603 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC15.63■□□□□ 0.09
TRGV9Q99603 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC15.63■□□□□ 0.09
TRGV9Q99603 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC15.63■□□□□ 0.09
TRGV9Q99603 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC15.63■□□□□ 0.09
TRGV9Q99603 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV9Q99603 UBE2DNL-204ENST00000602536 740 ntBASIC15.63■□□□□ 0.09
TRGV9Q99603 AL591742.1-201ENST00000604433 565 ntBASIC15.63■□□□□ 0.09
TRGV9Q99603 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC15.63■□□□□ 0.09
TRGV9Q99603 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV9Q99603 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC15.63■□□□□ 0.09
TRGV9Q99603 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.63■□□□□ 0.09
TRGV9Q99603 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC15.63■□□□□ 0.09
TRGV9Q99603 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.63■□□□□ 0.09
TRGV9Q99603 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
TRGV9Q99603 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
TRGV9Q99603 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV9Q99603 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRGV9Q99603 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV9Q99603 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRGV9Q99603 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV9Q99603 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC15.62■□□□□ 0.09
TRGV9Q99603 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV9Q99603 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
TRGV9Q99603 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV9Q99603 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.62■□□□□ 0.09
TRGV9Q99603 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.62■□□□□ 0.09
TRGV9Q99603 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV9Q99603 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
TRGV9Q99603 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
TRGV9Q99603 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC15.62■□□□□ 0.09
TRGV9Q99603 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV9Q99603 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
TRGV9Q99603 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRGV9Q99603 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC15.62■□□□□ 0.09
TRGV9Q99603 RNF165-205ENST00000588679 2904 ntBASIC15.62■□□□□ 0.09
TRGV9Q99603 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC15.62■□□□□ 0.09
TRGV9Q99603 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV9Q99603 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRGV9Q99603 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.62■□□□□ 0.09
TRGV9Q99603 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC15.62■□□□□ 0.09
TRGV9Q99603 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRGV9Q99603 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TRGV9Q99603 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV9Q99603 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV9Q99603 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV9Q99603 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV9Q99603 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV9Q99603 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV9Q99603 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.61■□□□□ 0.09
TRGV9Q99603 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV9Q99603 AC018445.3-201ENST00000624177 1945 ntBASIC15.61■□□□□ 0.09
TRGV9Q99603 CYP21A1P-202ENST00000354927 1481 ntBASIC15.61■□□□□ 0.09
TRGV9Q99603 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV9Q99603 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV9Q99603 PARP1-202ENST00000366792 553 ntTSL 3 BASIC15.61■□□□□ 0.09
TRGV9Q99603 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRGV9Q99603 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC15.61■□□□□ 0.09
TRGV9Q99603 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC15.61■□□□□ 0.09
TRGV9Q99603 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms