Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ECHDC3Q96DC8 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
ECHDC3Q96DC8 AL162377.1-201ENST00000618844 1793 ntBASIC20.11■□□□□ 0.81
ECHDC3Q96DC8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.11■□□□□ 0.81
ECHDC3Q96DC8 KRT17P3-201ENST00000420566 1262 ntBASIC20.11■□□□□ 0.81
ECHDC3Q96DC8 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ECHDC3Q96DC8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.11■□□□□ 0.81
ECHDC3Q96DC8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
ECHDC3Q96DC8 AC069544.1-201ENST00000609399 999 ntBASIC20.11■□□□□ 0.81
ECHDC3Q96DC8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.11■□□□□ 0.81
ECHDC3Q96DC8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ECHDC3Q96DC8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ECHDC3Q96DC8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ECHDC3Q96DC8 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ECHDC3Q96DC8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ECHDC3Q96DC8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
ECHDC3Q96DC8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
ECHDC3Q96DC8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
ECHDC3Q96DC8 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ECHDC3Q96DC8 PRORSD1P-201ENST00000295112 541 ntBASIC20.1■□□□□ 0.81
ECHDC3Q96DC8 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ECHDC3Q96DC8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ECHDC3Q96DC8 KRT18P29-201ENST00000397031 1267 ntBASIC20.1■□□□□ 0.81
ECHDC3Q96DC8 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.1■□□□□ 0.81
ECHDC3Q96DC8 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.1■□□□□ 0.81
ECHDC3Q96DC8 AC233263.1-201ENST00000578059 224 ntBASIC20.1■□□□□ 0.81
ECHDC3Q96DC8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.1■□□□□ 0.81
ECHDC3Q96DC8 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ECHDC3Q96DC8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ECHDC3Q96DC8 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
ECHDC3Q96DC8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ECHDC3Q96DC8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ECHDC3Q96DC8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ECHDC3Q96DC8 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ECHDC3Q96DC8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.09■□□□□ 0.81
ECHDC3Q96DC8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.09■□□□□ 0.81
ECHDC3Q96DC8 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.09■□□□□ 0.81
ECHDC3Q96DC8 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.09■□□□□ 0.81
ECHDC3Q96DC8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ECHDC3Q96DC8 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.09■□□□□ 0.81
ECHDC3Q96DC8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ECHDC3Q96DC8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
ECHDC3Q96DC8 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ECHDC3Q96DC8 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ECHDC3Q96DC8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.09■□□□□ 0.81
ECHDC3Q96DC8 AL512408.1-201ENST00000569378 2000 ntBASIC20.09■□□□□ 0.81
ECHDC3Q96DC8 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.08■□□□□ 0.81
ECHDC3Q96DC8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
ECHDC3Q96DC8 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ECHDC3Q96DC8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ECHDC3Q96DC8 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ECHDC3Q96DC8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ECHDC3Q96DC8 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.08■□□□□ 0.81
ECHDC3Q96DC8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
ECHDC3Q96DC8 RPS2P52-201ENST00000469610 820 ntBASIC20.08■□□□□ 0.81
ECHDC3Q96DC8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.08■□□□□ 0.81
ECHDC3Q96DC8 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.08■□□□□ 0.81
ECHDC3Q96DC8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.08■□□□□ 0.81
ECHDC3Q96DC8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ECHDC3Q96DC8 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.08■□□□□ 0.8
ECHDC3Q96DC8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.08■□□□□ 0.8
ECHDC3Q96DC8 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ECHDC3Q96DC8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ECHDC3Q96DC8 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ECHDC3Q96DC8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ECHDC3Q96DC8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ECHDC3Q96DC8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ECHDC3Q96DC8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.07■□□□□ 0.8
ECHDC3Q96DC8 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
ECHDC3Q96DC8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ECHDC3Q96DC8 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ECHDC3Q96DC8 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ECHDC3Q96DC8 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.07■□□□□ 0.8
ECHDC3Q96DC8 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ECHDC3Q96DC8 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.07■□□□□ 0.8
ECHDC3Q96DC8 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.07■□□□□ 0.8
ECHDC3Q96DC8 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.07■□□□□ 0.8
ECHDC3Q96DC8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ECHDC3Q96DC8 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ECHDC3Q96DC8 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ECHDC3Q96DC8 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ECHDC3Q96DC8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
ECHDC3Q96DC8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ECHDC3Q96DC8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ECHDC3Q96DC8 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.07■□□□□ 0.8
ECHDC3Q96DC8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ECHDC3Q96DC8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ECHDC3Q96DC8 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.07■□□□□ 0.8
ECHDC3Q96DC8 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ECHDC3Q96DC8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.06■□□□□ 0.8
ECHDC3Q96DC8 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.06■□□□□ 0.8
ECHDC3Q96DC8 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.06■□□□□ 0.8
ECHDC3Q96DC8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ECHDC3Q96DC8 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ECHDC3Q96DC8 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
ECHDC3Q96DC8 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
ECHDC3Q96DC8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ECHDC3Q96DC8 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
ECHDC3Q96DC8 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ECHDC3Q96DC8 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms