Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RHBDF1Q96CC6 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.56■□□□□ 0.72
RHBDF1Q96CC6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RHBDF1Q96CC6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.56■□□□□ 0.72
RHBDF1Q96CC6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.56■□□□□ 0.72
RHBDF1Q96CC6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
RHBDF1Q96CC6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.56■□□□□ 0.72
RHBDF1Q96CC6 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RHBDF1Q96CC6 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RHBDF1Q96CC6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RHBDF1Q96CC6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.56■□□□□ 0.72
RHBDF1Q96CC6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RHBDF1Q96CC6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RHBDF1Q96CC6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RHBDF1Q96CC6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RHBDF1Q96CC6 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RHBDF1Q96CC6 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RHBDF1Q96CC6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RHBDF1Q96CC6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RHBDF1Q96CC6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RHBDF1Q96CC6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RHBDF1Q96CC6 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.55■□□□□ 0.72
RHBDF1Q96CC6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.55■□□□□ 0.72
RHBDF1Q96CC6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RHBDF1Q96CC6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RHBDF1Q96CC6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.55■□□□□ 0.72
RHBDF1Q96CC6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.55■□□□□ 0.72
RHBDF1Q96CC6 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RHBDF1Q96CC6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RHBDF1Q96CC6 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RHBDF1Q96CC6 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RHBDF1Q96CC6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RHBDF1Q96CC6 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.54■□□□□ 0.72
RHBDF1Q96CC6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RHBDF1Q96CC6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
RHBDF1Q96CC6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RHBDF1Q96CC6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RHBDF1Q96CC6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RHBDF1Q96CC6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RHBDF1Q96CC6 MIR663A-201ENST00000385250 93 ntBASIC19.54■□□□□ 0.72
RHBDF1Q96CC6 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RHBDF1Q96CC6 CROCCP5-201ENST00000436658 830 ntBASIC19.54■□□□□ 0.72
RHBDF1Q96CC6 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
RHBDF1Q96CC6 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RHBDF1Q96CC6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RHBDF1Q96CC6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.54■□□□□ 0.72
RHBDF1Q96CC6 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.54■□□□□ 0.72
RHBDF1Q96CC6 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RHBDF1Q96CC6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RHBDF1Q96CC6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RHBDF1Q96CC6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.54■□□□□ 0.72
RHBDF1Q96CC6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.53■□□□□ 0.72
RHBDF1Q96CC6 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RHBDF1Q96CC6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RHBDF1Q96CC6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RHBDF1Q96CC6 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RHBDF1Q96CC6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.53■□□□□ 0.72
RHBDF1Q96CC6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RHBDF1Q96CC6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RHBDF1Q96CC6 AF201337.1-201ENST00000520239 748 ntBASIC19.53■□□□□ 0.72
RHBDF1Q96CC6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.53■□□□□ 0.72
RHBDF1Q96CC6 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RHBDF1Q96CC6 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RHBDF1Q96CC6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RHBDF1Q96CC6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RHBDF1Q96CC6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RHBDF1Q96CC6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
RHBDF1Q96CC6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RHBDF1Q96CC6 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RHBDF1Q96CC6 KRT8P17-201ENST00000453110 1448 ntBASIC19.52■□□□□ 0.72
RHBDF1Q96CC6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RHBDF1Q96CC6 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RHBDF1Q96CC6 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.52■□□□□ 0.72
RHBDF1Q96CC6 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
RHBDF1Q96CC6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RHBDF1Q96CC6 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.52■□□□□ 0.72
RHBDF1Q96CC6 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RHBDF1Q96CC6 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.52■□□□□ 0.72
RHBDF1Q96CC6 C2orf69P4-201ENST00000565394 541 ntBASIC19.52■□□□□ 0.72
RHBDF1Q96CC6 AC105036.2-201ENST00000569468 176 ntBASIC19.52■□□□□ 0.72
RHBDF1Q96CC6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.52■□□□□ 0.72
RHBDF1Q96CC6 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RHBDF1Q96CC6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.52■□□□□ 0.72
RHBDF1Q96CC6 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RHBDF1Q96CC6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RHBDF1Q96CC6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RHBDF1Q96CC6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
RHBDF1Q96CC6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
RHBDF1Q96CC6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RHBDF1Q96CC6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RHBDF1Q96CC6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RHBDF1Q96CC6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.51■□□□□ 0.71
RHBDF1Q96CC6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
RHBDF1Q96CC6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.51■□□□□ 0.71
RHBDF1Q96CC6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RHBDF1Q96CC6 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.51■□□□□ 0.71
RHBDF1Q96CC6 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.51■□□□□ 0.71
RHBDF1Q96CC6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RHBDF1Q96CC6 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RHBDF1Q96CC6 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms