Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SH3KBP1Q96B97 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SH3KBP1Q96B97 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SH3KBP1Q96B97 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH3KBP1Q96B97 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.84■□□□□ 0.77
SH3KBP1Q96B97 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.84■□□□□ 0.77
SH3KBP1Q96B97 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.84■□□□□ 0.77
SH3KBP1Q96B97 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH3KBP1Q96B97 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.84■□□□□ 0.77
SH3KBP1Q96B97 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH3KBP1Q96B97 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
SH3KBP1Q96B97 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SH3KBP1Q96B97 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SH3KBP1Q96B97 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.84■□□□□ 0.77
SH3KBP1Q96B97 AP003097.1-201ENST00000530657 1135 ntBASIC19.84■□□□□ 0.77
SH3KBP1Q96B97 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.84■□□□□ 0.77
SH3KBP1Q96B97 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SH3KBP1Q96B97 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.84■□□□□ 0.77
SH3KBP1Q96B97 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH3KBP1Q96B97 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SH3KBP1Q96B97 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH3KBP1Q96B97 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.84■□□□□ 0.77
SH3KBP1Q96B97 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH3KBP1Q96B97 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH3KBP1Q96B97 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SH3KBP1Q96B97 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SH3KBP1Q96B97 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SH3KBP1Q96B97 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SH3KBP1Q96B97 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.83■□□□□ 0.77
SH3KBP1Q96B97 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SH3KBP1Q96B97 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SH3KBP1Q96B97 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.83■□□□□ 0.77
SH3KBP1Q96B97 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.83■□□□□ 0.77
SH3KBP1Q96B97 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
SH3KBP1Q96B97 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SH3KBP1Q96B97 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SH3KBP1Q96B97 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SH3KBP1Q96B97 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SH3KBP1Q96B97 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SH3KBP1Q96B97 C2orf69P4-201ENST00000565394 541 ntBASIC19.83■□□□□ 0.77
SH3KBP1Q96B97 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.83■□□□□ 0.77
SH3KBP1Q96B97 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SH3KBP1Q96B97 AL356652.1-201ENST00000615962 565 ntBASIC19.83■□□□□ 0.77
SH3KBP1Q96B97 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SH3KBP1Q96B97 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SH3KBP1Q96B97 AC073130.3-201ENST00000624389 2278 ntBASIC19.83■□□□□ 0.76
SH3KBP1Q96B97 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SH3KBP1Q96B97 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.83■□□□□ 0.76
SH3KBP1Q96B97 AC027702.1-201ENST00000563810 1770 ntBASIC19.83■□□□□ 0.76
SH3KBP1Q96B97 AC092368.3-202ENST00000574180 1591 ntBASIC19.83■□□□□ 0.76
SH3KBP1Q96B97 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SH3KBP1Q96B97 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SH3KBP1Q96B97 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SH3KBP1Q96B97 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.82■□□□□ 0.76
SH3KBP1Q96B97 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SH3KBP1Q96B97 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SH3KBP1Q96B97 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SH3KBP1Q96B97 FP700111.2-201ENST00000619190 1892 ntBASIC19.82■□□□□ 0.76
SH3KBP1Q96B97 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
SH3KBP1Q96B97 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SH3KBP1Q96B97 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SH3KBP1Q96B97 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.82■□□□□ 0.76
SH3KBP1Q96B97 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SH3KBP1Q96B97 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.82■□□□□ 0.76
SH3KBP1Q96B97 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.82■□□□□ 0.76
SH3KBP1Q96B97 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SH3KBP1Q96B97 PNMA6B-201ENST00000538162 1200 ntBASIC19.82■□□□□ 0.76
SH3KBP1Q96B97 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
SH3KBP1Q96B97 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SH3KBP1Q96B97 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SH3KBP1Q96B97 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SH3KBP1Q96B97 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SH3KBP1Q96B97 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
SH3KBP1Q96B97 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SH3KBP1Q96B97 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SH3KBP1Q96B97 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SH3KBP1Q96B97 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SH3KBP1Q96B97 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SH3KBP1Q96B97 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SH3KBP1Q96B97 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SH3KBP1Q96B97 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.81■□□□□ 0.76
SH3KBP1Q96B97 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SH3KBP1Q96B97 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SH3KBP1Q96B97 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SH3KBP1Q96B97 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SH3KBP1Q96B97 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.81■□□□□ 0.76
SH3KBP1Q96B97 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SH3KBP1Q96B97 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SH3KBP1Q96B97 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SH3KBP1Q96B97 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SH3KBP1Q96B97 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
SH3KBP1Q96B97 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SH3KBP1Q96B97 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
SH3KBP1Q96B97 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.81■□□□□ 0.76
SH3KBP1Q96B97 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SH3KBP1Q96B97 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SH3KBP1Q96B97 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SH3KBP1Q96B97 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.8■□□□□ 0.76
SH3KBP1Q96B97 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SH3KBP1Q96B97 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms