Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP2A3Q93084 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP2A3Q93084 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.1■□□□□ 0.97
ATP2A3Q93084 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATP2A3Q93084 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATP2A3Q93084 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.1■□□□□ 0.97
ATP2A3Q93084 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.1■□□□□ 0.97
ATP2A3Q93084 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
ATP2A3Q93084 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2A3Q93084 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.09■□□□□ 0.97
ATP2A3Q93084 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2A3Q93084 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2A3Q93084 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.09■□□□□ 0.97
ATP2A3Q93084 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2A3Q93084 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2A3Q93084 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.09■□□□□ 0.97
ATP2A3Q93084 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.09■□□□□ 0.97
ATP2A3Q93084 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.09■□□□□ 0.97
ATP2A3Q93084 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2A3Q93084 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
ATP2A3Q93084 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
ATP2A3Q93084 RPPH1-201ENST00000516869 333 ntBASIC21.09■□□□□ 0.97
ATP2A3Q93084 C1QBPP2-201ENST00000528754 825 ntBASIC21.09■□□□□ 0.97
ATP2A3Q93084 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.09■□□□□ 0.97
ATP2A3Q93084 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.09■□□□□ 0.97
ATP2A3Q93084 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2A3Q93084 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2A3Q93084 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ATP2A3Q93084 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.08■□□□□ 0.97
ATP2A3Q93084 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.08■□□□□ 0.97
ATP2A3Q93084 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.08■□□□□ 0.97
ATP2A3Q93084 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.08■□□□□ 0.97
ATP2A3Q93084 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
ATP2A3Q93084 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP2A3Q93084 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
ATP2A3Q93084 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.08■□□□□ 0.97
ATP2A3Q93084 AC008550.1-201ENST00000511500 884 ntBASIC21.08■□□□□ 0.97
ATP2A3Q93084 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.08■□□□□ 0.97
ATP2A3Q93084 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.08■□□□□ 0.97
ATP2A3Q93084 RN7SL471P-201ENST00000580476 299 ntBASIC21.08■□□□□ 0.97
ATP2A3Q93084 AC069544.1-201ENST00000609399 999 ntBASIC21.08■□□□□ 0.97
ATP2A3Q93084 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
ATP2A3Q93084 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ATP2A3Q93084 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ATP2A3Q93084 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
ATP2A3Q93084 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ATP2A3Q93084 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.07■□□□□ 0.96
ATP2A3Q93084 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A3Q93084 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.07■□□□□ 0.96
ATP2A3Q93084 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A3Q93084 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A3Q93084 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A3Q93084 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.07■□□□□ 0.96
ATP2A3Q93084 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.07■□□□□ 0.96
ATP2A3Q93084 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A3Q93084 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.07■□□□□ 0.96
ATP2A3Q93084 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.07■□□□□ 0.96
ATP2A3Q93084 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A3Q93084 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.07■□□□□ 0.96
ATP2A3Q93084 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.07■□□□□ 0.96
ATP2A3Q93084 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.07■□□□□ 0.96
ATP2A3Q93084 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A3Q93084 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.07■□□□□ 0.96
ATP2A3Q93084 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
ATP2A3Q93084 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A3Q93084 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A3Q93084 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A3Q93084 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
ATP2A3Q93084 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A3Q93084 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A3Q93084 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
ATP2A3Q93084 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A3Q93084 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.06■□□□□ 0.96
ATP2A3Q93084 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.06■□□□□ 0.96
ATP2A3Q93084 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.06■□□□□ 0.96
ATP2A3Q93084 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A3Q93084 POM121L13P-201ENST00000422362 380 ntBASIC21.06■□□□□ 0.96
ATP2A3Q93084 AL596275.1-201ENST00000423464 877 ntBASIC21.06■□□□□ 0.96
ATP2A3Q93084 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A3Q93084 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A3Q93084 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.06■□□□□ 0.96
ATP2A3Q93084 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A3Q93084 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A3Q93084 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
ATP2A3Q93084 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A3Q93084 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A3Q93084 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A3Q93084 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A3Q93084 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
ATP2A3Q93084 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2A3Q93084 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2A3Q93084 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
ATP2A3Q93084 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2A3Q93084 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2A3Q93084 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
ATP2A3Q93084 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2A3Q93084 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2A3Q93084 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
ATP2A3Q93084 MIR718-201ENST00000390190 70 ntBASIC21.05■□□□□ 0.96
ATP2A3Q93084 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms