Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
SMARCC1Q92922 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SMARCC1Q92922 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
SMARCC1Q92922 PTBP1P-201ENST00000554374 1601 ntBASIC25.81■■□□□ 1.72
SMARCC1Q92922 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
SMARCC1Q92922 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
SMARCC1Q92922 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25.81■■□□□ 1.72
SMARCC1Q92922 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SMARCC1Q92922 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SMARCC1Q92922 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC25.81■■□□□ 1.72
SMARCC1Q92922 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SMARCC1Q92922 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
SMARCC1Q92922 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC25.81■■□□□ 1.72
SMARCC1Q92922 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
SMARCC1Q92922 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC25.81■■□□□ 1.72
SMARCC1Q92922 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC25.81■■□□□ 1.72
SMARCC1Q92922 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC25.81■■□□□ 1.72
SMARCC1Q92922 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC25.81■■□□□ 1.72
SMARCC1Q92922 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC25.81■■□□□ 1.72
SMARCC1Q92922 CLN6-221ENST00000637494 765 ntTSL 5 BASIC25.81■■□□□ 1.72
SMARCC1Q92922 AL031985.4-201ENST00000642138 673 ntBASIC25.81■■□□□ 1.72
SMARCC1Q92922 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SMARCC1Q92922 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SMARCC1Q92922 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SMARCC1Q92922 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SMARCC1Q92922 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC25.8■■□□□ 1.72
SMARCC1Q92922 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SMARCC1Q92922 TERT-206ENST00000508104 2486 ntTSL 5 BASIC25.8■■□□□ 1.72
SMARCC1Q92922 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SMARCC1Q92922 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SMARCC1Q92922 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
SMARCC1Q92922 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC25.8■■□□□ 1.72
SMARCC1Q92922 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC25.8■■□□□ 1.72
SMARCC1Q92922 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
SMARCC1Q92922 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC25.8■■□□□ 1.72
SMARCC1Q92922 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC25.8■■□□□ 1.72
SMARCC1Q92922 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC25.8■■□□□ 1.72
SMARCC1Q92922 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC25.8■■□□□ 1.72
SMARCC1Q92922 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SMARCC1Q92922 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
SMARCC1Q92922 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
SMARCC1Q92922 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SMARCC1Q92922 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
SMARCC1Q92922 GUSBP5-202ENST00000510805 1989 ntBASIC25.79■■□□□ 1.72
SMARCC1Q92922 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC25.79■■□□□ 1.72
SMARCC1Q92922 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SMARCC1Q92922 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC25.79■■□□□ 1.72
SMARCC1Q92922 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SMARCC1Q92922 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC25.79■■□□□ 1.72
SMARCC1Q92922 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
SMARCC1Q92922 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC25.79■■□□□ 1.72
SMARCC1Q92922 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC25.79■■□□□ 1.72
SMARCC1Q92922 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SMARCC1Q92922 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC25.79■■□□□ 1.72
SMARCC1Q92922 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
SMARCC1Q92922 GRAMD4P8-201ENST00000605465 1115 ntBASIC25.79■■□□□ 1.72
SMARCC1Q92922 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SMARCC1Q92922 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC25.79■■□□□ 1.72
SMARCC1Q92922 KRT8P20-201ENST00000423953 1409 ntBASIC25.79■■□□□ 1.72
SMARCC1Q92922 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
SMARCC1Q92922 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SMARCC1Q92922 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
SMARCC1Q92922 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
SMARCC1Q92922 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SMARCC1Q92922 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC25.78■■□□□ 1.72
SMARCC1Q92922 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
SMARCC1Q92922 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
SMARCC1Q92922 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SMARCC1Q92922 FSCN1P1-201ENST00000568912 1481 ntBASIC25.78■■□□□ 1.72
SMARCC1Q92922 GALC-202ENST00000393568 2054 ntTSL 2 BASIC25.78■■□□□ 1.72
SMARCC1Q92922 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
SMARCC1Q92922 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SMARCC1Q92922 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SMARCC1Q92922 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SMARCC1Q92922 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SMARCC1Q92922 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SMARCC1Q92922 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC25.77■■□□□ 1.72
SMARCC1Q92922 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC25.77■■□□□ 1.72
SMARCC1Q92922 C2orf69P3-201ENST00000565542 1120 ntBASIC25.77■■□□□ 1.72
SMARCC1Q92922 AC026271.3-201ENST00000571884 352 ntBASIC25.77■■□□□ 1.72
SMARCC1Q92922 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SMARCC1Q92922 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
SMARCC1Q92922 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SMARCC1Q92922 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SMARCC1Q92922 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SMARCC1Q92922 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC25.77■■□□□ 1.72
SMARCC1Q92922 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC25.77■■□□□ 1.72
SMARCC1Q92922 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC25.76■■□□□ 1.72
SMARCC1Q92922 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SMARCC1Q92922 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SMARCC1Q92922 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC25.76■■□□□ 1.71
SMARCC1Q92922 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SMARCC1Q92922 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC25.76■■□□□ 1.71
SMARCC1Q92922 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC25.76■■□□□ 1.71
SMARCC1Q92922 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC25.76■■□□□ 1.71
SMARCC1Q92922 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SMARCC1Q92922 AC010203.1-204ENST00000548782 407 ntBASIC25.76■■□□□ 1.71
SMARCC1Q92922 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SMARCC1Q92922 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC25.76■■□□□ 1.71
SMARCC1Q92922 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC25.76■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms