Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 PRKY-204ENST00000533551 1019 ntBASIC26.26■■□□□ 1.79
RTF1Q92541 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC26.26■■□□□ 1.79
RTF1Q92541 AL031963.3-201ENST00000606441 850 ntBASIC26.26■■□□□ 1.79
RTF1Q92541 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC26.26■■□□□ 1.79
RTF1Q92541 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RTF1Q92541 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC26.25■■□□□ 1.79
RTF1Q92541 H19-201ENST00000411754 1788 ntTSL 5 BASIC26.25■■□□□ 1.79
RTF1Q92541 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
RTF1Q92541 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RTF1Q92541 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC26.25■■□□□ 1.79
RTF1Q92541 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC26.25■■□□□ 1.79
RTF1Q92541 KRASP1-201ENST00000407852 552 ntBASIC26.25■■□□□ 1.79
RTF1Q92541 AC133681.1-201ENST00000465482 601 ntBASIC26.25■■□□□ 1.79
RTF1Q92541 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC26.25■■□□□ 1.79
RTF1Q92541 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC26.25■■□□□ 1.79
RTF1Q92541 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RTF1Q92541 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RTF1Q92541 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RTF1Q92541 DPP3P2-201ENST00000416030 1696 ntBASIC26.25■■□□□ 1.79
RTF1Q92541 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RTF1Q92541 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RTF1Q92541 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
RTF1Q92541 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RTF1Q92541 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
RTF1Q92541 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
RTF1Q92541 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
RTF1Q92541 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
RTF1Q92541 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC26.24■■□□□ 1.79
RTF1Q92541 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RTF1Q92541 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RTF1Q92541 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RTF1Q92541 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RTF1Q92541 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC26.24■■□□□ 1.79
RTF1Q92541 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RTF1Q92541 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
RTF1Q92541 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
RTF1Q92541 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RTF1Q92541 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RTF1Q92541 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC26.23■■□□□ 1.79
RTF1Q92541 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC26.23■■□□□ 1.79
RTF1Q92541 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RTF1Q92541 MIR718-201ENST00000390190 70 ntBASIC26.23■■□□□ 1.79
RTF1Q92541 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC26.23■■□□□ 1.79
RTF1Q92541 AC110285.5-201ENST00000611501 352 ntBASIC26.23■■□□□ 1.79
RTF1Q92541 AL121829.2-201ENST00000620908 328 ntBASIC26.23■■□□□ 1.79
RTF1Q92541 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
RTF1Q92541 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
RTF1Q92541 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
RTF1Q92541 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC26.23■■□□□ 1.79
RTF1Q92541 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC26.23■■□□□ 1.79
RTF1Q92541 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
RTF1Q92541 KRT8P17-201ENST00000453110 1448 ntBASIC26.22■■□□□ 1.79
RTF1Q92541 AC092720.2-201ENST00000602388 1665 ntBASIC26.22■■□□□ 1.79
RTF1Q92541 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
RTF1Q92541 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC26.22■■□□□ 1.79
RTF1Q92541 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RTF1Q92541 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC26.22■■□□□ 1.79
RTF1Q92541 MAX-217ENST00000557277 728 ntTSL 3 BASIC26.22■■□□□ 1.79
RTF1Q92541 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RTF1Q92541 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
RTF1Q92541 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC26.22■■□□□ 1.79
RTF1Q92541 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RTF1Q92541 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC26.21■■□□□ 1.79
RTF1Q92541 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC26.21■■□□□ 1.79
RTF1Q92541 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RTF1Q92541 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RTF1Q92541 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RTF1Q92541 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RTF1Q92541 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RTF1Q92541 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RTF1Q92541 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC26.21■■□□□ 1.79
RTF1Q92541 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC26.2■■□□□ 1.79
RTF1Q92541 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.79
RTF1Q92541 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RTF1Q92541 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RTF1Q92541 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
RTF1Q92541 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RTF1Q92541 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RTF1Q92541 AL596275.1-201ENST00000423464 877 ntBASIC26.2■■□□□ 1.78
RTF1Q92541 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC26.2■■□□□ 1.78
RTF1Q92541 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC26.2■■□□□ 1.78
RTF1Q92541 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC26.2■■□□□ 1.78
RTF1Q92541 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
RTF1Q92541 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC26.2■■□□□ 1.78
RTF1Q92541 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC26.2■■□□□ 1.78
RTF1Q92541 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC26.2■■□□□ 1.78
RTF1Q92541 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC26.2■■□□□ 1.78
RTF1Q92541 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC26.2■■□□□ 1.78
RTF1Q92541 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC26.2■■□□□ 1.78
RTF1Q92541 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
RTF1Q92541 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC26.2■■□□□ 1.78
RTF1Q92541 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC26.19■■□□□ 1.78
RTF1Q92541 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC26.19■■□□□ 1.78
RTF1Q92541 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC26.19■■□□□ 1.78
RTF1Q92541 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC26.19■■□□□ 1.78
RTF1Q92541 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
RTF1Q92541 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RTF1Q92541 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RTF1Q92541 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RTF1Q92541 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms