Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 AC125437.2-201ENST00000625180 2167 ntBASIC17.6■□□□□ 0.41
RAB40AQ8WXH6 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAB40AQ8WXH6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB40AQ8WXH6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB40AQ8WXH6 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40AQ8WXH6 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RAB40AQ8WXH6 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40AQ8WXH6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.59■□□□□ 0.41
RAB40AQ8WXH6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RAB40AQ8WXH6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40AQ8WXH6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.59■□□□□ 0.41
RAB40AQ8WXH6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40AQ8WXH6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RAB40AQ8WXH6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RAB40AQ8WXH6 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.59■□□□□ 0.41
RAB40AQ8WXH6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40AQ8WXH6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RAB40AQ8WXH6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40AQ8WXH6 AC080038.1-201ENST00000611274 1154 ntBASIC17.59■□□□□ 0.41
RAB40AQ8WXH6 BID-214ENST00000617586 542 ntTSL 5 BASIC17.59■□□□□ 0.41
RAB40AQ8WXH6 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40AQ8WXH6 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40AQ8WXH6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RAB40AQ8WXH6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40AQ8WXH6 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.59■□□□□ 0.41
RAB40AQ8WXH6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40AQ8WXH6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RAB40AQ8WXH6 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
RAB40AQ8WXH6 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAB40AQ8WXH6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAB40AQ8WXH6 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAB40AQ8WXH6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAB40AQ8WXH6 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAB40AQ8WXH6 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.58■□□□□ 0.41
RAB40AQ8WXH6 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
RAB40AQ8WXH6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAB40AQ8WXH6 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RAB40AQ8WXH6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB40AQ8WXH6 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.58■□□□□ 0.4
RAB40AQ8WXH6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB40AQ8WXH6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.58■□□□□ 0.4
RAB40AQ8WXH6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.58■□□□□ 0.4
RAB40AQ8WXH6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.58■□□□□ 0.4
RAB40AQ8WXH6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.58■□□□□ 0.4
RAB40AQ8WXH6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.58■□□□□ 0.4
RAB40AQ8WXH6 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB40AQ8WXH6 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB40AQ8WXH6 TNXA-203ENST00000507684 2038 ntBASIC17.58■□□□□ 0.4
RAB40AQ8WXH6 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
RAB40AQ8WXH6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RAB40AQ8WXH6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB40AQ8WXH6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.58■□□□□ 0.4
RAB40AQ8WXH6 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.58■□□□□ 0.4
RAB40AQ8WXH6 AL158211.5-201ENST00000623583 2518 ntBASIC17.58■□□□□ 0.4
RAB40AQ8WXH6 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB40AQ8WXH6 AP000974.1-201ENST00000623909 2387 ntBASIC17.58■□□□□ 0.4
RAB40AQ8WXH6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB40AQ8WXH6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.58■□□□□ 0.4
RAB40AQ8WXH6 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40AQ8WXH6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40AQ8WXH6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40AQ8WXH6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40AQ8WXH6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40AQ8WXH6 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40AQ8WXH6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
RAB40AQ8WXH6 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
RAB40AQ8WXH6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40AQ8WXH6 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40AQ8WXH6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40AQ8WXH6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40AQ8WXH6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40AQ8WXH6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.57■□□□□ 0.4
RAB40AQ8WXH6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.57■□□□□ 0.4
RAB40AQ8WXH6 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40AQ8WXH6 AP001160.3-201ENST00000601484 763 ntBASIC17.57■□□□□ 0.4
RAB40AQ8WXH6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.57■□□□□ 0.4
RAB40AQ8WXH6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40AQ8WXH6 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.57■□□□□ 0.4
RAB40AQ8WXH6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.57■□□□□ 0.4
RAB40AQ8WXH6 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.57■□□□□ 0.4
RAB40AQ8WXH6 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.57■□□□□ 0.4
RAB40AQ8WXH6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RAB40AQ8WXH6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40AQ8WXH6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB40AQ8WXH6 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAB40AQ8WXH6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.56■□□□□ 0.4
RAB40AQ8WXH6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB40AQ8WXH6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB40AQ8WXH6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB40AQ8WXH6 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.56■□□□□ 0.4
RAB40AQ8WXH6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAB40AQ8WXH6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAB40AQ8WXH6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB40AQ8WXH6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.56■□□□□ 0.4
RAB40AQ8WXH6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.56■□□□□ 0.4
RAB40AQ8WXH6 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
RAB40AQ8WXH6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.56■□□□□ 0.4
RAB40AQ8WXH6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAB40AQ8WXH6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.56■□□□□ 0.4
RAB40AQ8WXH6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms