Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRUB1Q8WWH5 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRUB1Q8WWH5 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 AC116050.2-201ENST00000612102 1779 ntBASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 AC245052.3-201ENST00000450182 901 ntBASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRUB1Q8WWH5 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRUB1Q8WWH5 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.34■□□□□ 0.53
TRUB1Q8WWH5 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TRUB1Q8WWH5 KRT16P2-201ENST00000414673 1423 ntBASIC18.34■□□□□ 0.53
TRUB1Q8WWH5 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRUB1Q8WWH5 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRUB1Q8WWH5 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRUB1Q8WWH5 UNC93B3-201ENST00000308076 687 ntBASIC18.34■□□□□ 0.53
TRUB1Q8WWH5 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.34■□□□□ 0.53
TRUB1Q8WWH5 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.34■□□□□ 0.53
TRUB1Q8WWH5 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRUB1Q8WWH5 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.34■□□□□ 0.53
TRUB1Q8WWH5 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.34■□□□□ 0.53
TRUB1Q8WWH5 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
TRUB1Q8WWH5 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TRUB1Q8WWH5 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.34■□□□□ 0.53
TRUB1Q8WWH5 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.34■□□□□ 0.53
TRUB1Q8WWH5 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRUB1Q8WWH5 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRUB1Q8WWH5 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRUB1Q8WWH5 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRUB1Q8WWH5 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRUB1Q8WWH5 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TRUB1Q8WWH5 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.34■□□□□ 0.53
TRUB1Q8WWH5 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRUB1Q8WWH5 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRUB1Q8WWH5 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.33■□□□□ 0.53
TRUB1Q8WWH5 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRUB1Q8WWH5 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRUB1Q8WWH5 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
TRUB1Q8WWH5 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRUB1Q8WWH5 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.33■□□□□ 0.52
TRUB1Q8WWH5 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.33■□□□□ 0.52
TRUB1Q8WWH5 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRUB1Q8WWH5 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRUB1Q8WWH5 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRUB1Q8WWH5 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TRUB1Q8WWH5 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.33■□□□□ 0.52
TRUB1Q8WWH5 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRUB1Q8WWH5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRUB1Q8WWH5 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRUB1Q8WWH5 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRUB1Q8WWH5 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TRUB1Q8WWH5 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRUB1Q8WWH5 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRUB1Q8WWH5 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRUB1Q8WWH5 TSPY26P-201ENST00000476365 1326 ntBASIC18.32■□□□□ 0.52
TRUB1Q8WWH5 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRUB1Q8WWH5 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRUB1Q8WWH5 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRUB1Q8WWH5 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRUB1Q8WWH5 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.32■□□□□ 0.52
TRUB1Q8WWH5 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRUB1Q8WWH5 MIR572-201ENST00000384983 95 ntBASIC18.32■□□□□ 0.52
TRUB1Q8WWH5 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRUB1Q8WWH5 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.32■□□□□ 0.52
TRUB1Q8WWH5 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.32■□□□□ 0.52
TRUB1Q8WWH5 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
TRUB1Q8WWH5 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TRUB1Q8WWH5 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.32■□□□□ 0.52
TRUB1Q8WWH5 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms