Protein–RNA interactions for Protein: Q8NG06

TRIM58, E3 ubiquitin-protein ligase TRIM58, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58Q8NG06 KRT18P20-201ENST00000548986 1279 ntBASIC21.3■■□□□ 1
TRIM58Q8NG06 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.3■■□□□ 1
TRIM58Q8NG06 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.3■■□□□ 1
TRIM58Q8NG06 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.3■■□□□ 1
TRIM58Q8NG06 AC008406.3-201ENST00000620001 1374 ntBASIC21.3■■□□□ 1
TRIM58Q8NG06 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM58Q8NG06 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.3■■□□□ 1
TRIM58Q8NG06 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
TRIM58Q8NG06 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.3■■□□□ 1
TRIM58Q8NG06 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.3■■□□□ 1
TRIM58Q8NG06 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.3■■□□□ 1
TRIM58Q8NG06 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.29■■□□□ 1
TRIM58Q8NG06 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM58Q8NG06 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
TRIM58Q8NG06 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM58Q8NG06 AC004408.2-201ENST00000623613 2777 ntBASIC21.29■■□□□ 1
TRIM58Q8NG06 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM58Q8NG06 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
TRIM58Q8NG06 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
TRIM58Q8NG06 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
TRIM58Q8NG06 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM58Q8NG06 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM58Q8NG06 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM58Q8NG06 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.29■■□□□ 1
TRIM58Q8NG06 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.29■■□□□ 1
TRIM58Q8NG06 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.29■■□□□ 1
TRIM58Q8NG06 AP001160.3-201ENST00000601484 763 ntBASIC21.29■■□□□ 1
TRIM58Q8NG06 AC104187.1-201ENST00000607510 612 ntBASIC21.29■■□□□ 1
TRIM58Q8NG06 AC131212.1-201ENST00000613771 668 ntBASIC21.29■■□□□ 1
TRIM58Q8NG06 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.29■■□□□ 1
TRIM58Q8NG06 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM58Q8NG06 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM58Q8NG06 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.29■■□□□ 1
TRIM58Q8NG06 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM58Q8NG06 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM58Q8NG06 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM58Q8NG06 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM58Q8NG06 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.28■■□□□ 1
TRIM58Q8NG06 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.28■■□□□ 1
TRIM58Q8NG06 Z82202.1-201ENST00000623446 1880 ntBASIC21.28■■□□□ 1
TRIM58Q8NG06 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.28■■□□□ 1
TRIM58Q8NG06 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM58Q8NG06 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.28■■□□□ 1
TRIM58Q8NG06 AC105265.2-201ENST00000467189 838 ntBASIC21.28■■□□□ 1
TRIM58Q8NG06 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.28■■□□□ 1
TRIM58Q8NG06 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TRIM58Q8NG06 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM58Q8NG06 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.28■■□□□ 1
TRIM58Q8NG06 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.28■■□□□ 1
TRIM58Q8NG06 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM58Q8NG06 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.28■■□□□ 1
TRIM58Q8NG06 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.28■■□□□ 1
TRIM58Q8NG06 RBM17P2-201ENST00000616397 1405 ntBASIC21.28■■□□□ 1
TRIM58Q8NG06 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
TRIM58Q8NG06 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM58Q8NG06 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TRIM58Q8NG06 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRIM58Q8NG06 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TRIM58Q8NG06 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRIM58Q8NG06 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.27■■□□□ 1
TRIM58Q8NG06 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM58Q8NG06 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM58Q8NG06 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.27■■□□□ 1
TRIM58Q8NG06 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM58Q8NG06 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.27■■□□□ 1
TRIM58Q8NG06 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM58Q8NG06 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM58Q8NG06 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM58Q8NG06 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.27■■□□□ 1
TRIM58Q8NG06 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM58Q8NG06 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.27■■□□□ 1
TRIM58Q8NG06 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.27■■□□□ 1
TRIM58Q8NG06 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM58Q8NG06 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.27■■□□□ 1
TRIM58Q8NG06 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.27■■□□□ 1
TRIM58Q8NG06 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.27■■□□□ 1
TRIM58Q8NG06 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.27■■□□□ 1
TRIM58Q8NG06 AC110285.6-201ENST00000617652 491 ntBASIC21.27■■□□□ 1
TRIM58Q8NG06 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
TRIM58Q8NG06 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
TRIM58Q8NG06 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRIM58Q8NG06 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.27■■□□□ 1
TRIM58Q8NG06 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM58Q8NG06 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRIM58Q8NG06 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRIM58Q8NG06 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.27■□□□□ 0.99
TRIM58Q8NG06 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.26■□□□□ 0.99
TRIM58Q8NG06 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM58Q8NG06 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM58Q8NG06 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM58Q8NG06 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM58Q8NG06 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM58Q8NG06 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.26■□□□□ 0.99
TRIM58Q8NG06 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.26■□□□□ 0.99
TRIM58Q8NG06 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.26■□□□□ 0.99
TRIM58Q8NG06 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.26■□□□□ 0.99
TRIM58Q8NG06 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.26■□□□□ 0.99
TRIM58Q8NG06 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.26■□□□□ 0.99
TRIM58Q8NG06 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM58Q8NG06 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms