Protein–RNA interactions for Protein: Q8NDN9

RCBTB1, RCC1 and BTB domain-containing protein 1, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCBTB1Q8NDN9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RCBTB1Q8NDN9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.32■□□□□ 0.68
RCBTB1Q8NDN9 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
RCBTB1Q8NDN9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RCBTB1Q8NDN9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.32■□□□□ 0.68
RCBTB1Q8NDN9 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RCBTB1Q8NDN9 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RCBTB1Q8NDN9 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RCBTB1Q8NDN9 PRKY-204ENST00000533551 1019 ntBASIC19.32■□□□□ 0.68
RCBTB1Q8NDN9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.32■□□□□ 0.68
RCBTB1Q8NDN9 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RCBTB1Q8NDN9 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.32■□□□□ 0.68
RCBTB1Q8NDN9 AL049637.2-201ENST00000641778 930 ntBASIC19.32■□□□□ 0.68
RCBTB1Q8NDN9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RCBTB1Q8NDN9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RCBTB1Q8NDN9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RCBTB1Q8NDN9 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RCBTB1Q8NDN9 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RCBTB1Q8NDN9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.32■□□□□ 0.68
RCBTB1Q8NDN9 AC121338.2-201ENST00000622535 1744 ntBASIC19.31■□□□□ 0.68
RCBTB1Q8NDN9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.31■□□□□ 0.68
RCBTB1Q8NDN9 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RCBTB1Q8NDN9 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RCBTB1Q8NDN9 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
RCBTB1Q8NDN9 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.31■□□□□ 0.68
RCBTB1Q8NDN9 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.31■□□□□ 0.68
RCBTB1Q8NDN9 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.31■□□□□ 0.68
RCBTB1Q8NDN9 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.31■□□□□ 0.68
RCBTB1Q8NDN9 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
RCBTB1Q8NDN9 REXO1L12P-201ENST00000622156 912 ntBASIC19.31■□□□□ 0.68
RCBTB1Q8NDN9 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.31■□□□□ 0.68
RCBTB1Q8NDN9 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.31■□□□□ 0.68
RCBTB1Q8NDN9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RCBTB1Q8NDN9 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RCBTB1Q8NDN9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RCBTB1Q8NDN9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RCBTB1Q8NDN9 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RCBTB1Q8NDN9 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RCBTB1Q8NDN9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RCBTB1Q8NDN9 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RCBTB1Q8NDN9 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RCBTB1Q8NDN9 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
RCBTB1Q8NDN9 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
RCBTB1Q8NDN9 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RCBTB1Q8NDN9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RCBTB1Q8NDN9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RCBTB1Q8NDN9 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RCBTB1Q8NDN9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RCBTB1Q8NDN9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RCBTB1Q8NDN9 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.3■□□□□ 0.68
RCBTB1Q8NDN9 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.29■□□□□ 0.68
RCBTB1Q8NDN9 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RCBTB1Q8NDN9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RCBTB1Q8NDN9 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RCBTB1Q8NDN9 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.29■□□□□ 0.68
RCBTB1Q8NDN9 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.29■□□□□ 0.68
RCBTB1Q8NDN9 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RCBTB1Q8NDN9 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RCBTB1Q8NDN9 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RCBTB1Q8NDN9 AC211429.1-201ENST00000415277 523 ntBASIC19.29■□□□□ 0.68
RCBTB1Q8NDN9 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
RCBTB1Q8NDN9 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.29■□□□□ 0.68
RCBTB1Q8NDN9 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
RCBTB1Q8NDN9 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.29■□□□□ 0.68
RCBTB1Q8NDN9 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RCBTB1Q8NDN9 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
RCBTB1Q8NDN9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RCBTB1Q8NDN9 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RCBTB1Q8NDN9 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RCBTB1Q8NDN9 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RCBTB1Q8NDN9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RCBTB1Q8NDN9 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RCBTB1Q8NDN9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RCBTB1Q8NDN9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RCBTB1Q8NDN9 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RCBTB1Q8NDN9 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.28■□□□□ 0.68
RCBTB1Q8NDN9 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RCBTB1Q8NDN9 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.28■□□□□ 0.68
RCBTB1Q8NDN9 AP001412.1-201ENST00000608405 714 ntBASIC19.28■□□□□ 0.68
RCBTB1Q8NDN9 AC113410.3-201ENST00000623366 203 ntBASIC19.28■□□□□ 0.68
RCBTB1Q8NDN9 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RCBTB1Q8NDN9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RCBTB1Q8NDN9 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RCBTB1Q8NDN9 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.28■□□□□ 0.68
RCBTB1Q8NDN9 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.28■□□□□ 0.68
RCBTB1Q8NDN9 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RCBTB1Q8NDN9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RCBTB1Q8NDN9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.28■□□□□ 0.68
RCBTB1Q8NDN9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RCBTB1Q8NDN9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RCBTB1Q8NDN9 KRT17P2-201ENST00000300992 1314 ntBASIC19.27■□□□□ 0.68
RCBTB1Q8NDN9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
RCBTB1Q8NDN9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
RCBTB1Q8NDN9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RCBTB1Q8NDN9 AL135905.2-201ENST00000584934 1404 ntBASIC19.27■□□□□ 0.68
RCBTB1Q8NDN9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.27■□□□□ 0.68
RCBTB1Q8NDN9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.27■□□□□ 0.68
RCBTB1Q8NDN9 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RCBTB1Q8NDN9 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RCBTB1Q8NDN9 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms