Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TTC39CQ8N584 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TTC39CQ8N584 BX119927.1-201ENST00000636596 1552 ntBASIC21.35■■□□□ 1.01
TTC39CQ8N584 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TTC39CQ8N584 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
TTC39CQ8N584 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TTC39CQ8N584 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TTC39CQ8N584 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TTC39CQ8N584 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TTC39CQ8N584 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.34■■□□□ 1.01
TTC39CQ8N584 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
TTC39CQ8N584 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.34■■□□□ 1.01
TTC39CQ8N584 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TTC39CQ8N584 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.34■■□□□ 1.01
TTC39CQ8N584 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TTC39CQ8N584 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.34■■□□□ 1.01
TTC39CQ8N584 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TTC39CQ8N584 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.34■■□□□ 1.01
TTC39CQ8N584 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
TTC39CQ8N584 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
TTC39CQ8N584 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.34■■□□□ 1.01
TTC39CQ8N584 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
TTC39CQ8N584 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
TTC39CQ8N584 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.34■■□□□ 1.01
TTC39CQ8N584 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.34■■□□□ 1.01
TTC39CQ8N584 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.34■■□□□ 1.01
TTC39CQ8N584 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TTC39CQ8N584 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TTC39CQ8N584 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TTC39CQ8N584 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
TTC39CQ8N584 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TTC39CQ8N584 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.33■■□□□ 1.01
TTC39CQ8N584 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TTC39CQ8N584 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.33■■□□□ 1.01
TTC39CQ8N584 UNC93B5-201ENST00000530315 699 ntBASIC21.33■■□□□ 1.01
TTC39CQ8N584 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TTC39CQ8N584 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.33■■□□□ 1.01
TTC39CQ8N584 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.33■■□□□ 1.01
TTC39CQ8N584 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TTC39CQ8N584 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TTC39CQ8N584 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.33■■□□□ 1
TTC39CQ8N584 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.33■■□□□ 1
TTC39CQ8N584 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TTC39CQ8N584 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.33■■□□□ 1
TTC39CQ8N584 AL157384.1-201ENST00000445995 2473 ntBASIC21.33■■□□□ 1
TTC39CQ8N584 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TTC39CQ8N584 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
TTC39CQ8N584 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TTC39CQ8N584 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TTC39CQ8N584 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
TTC39CQ8N584 AC092667.1-201ENST00000434301 2586 ntBASIC21.32■■□□□ 1
TTC39CQ8N584 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.32■■□□□ 1
TTC39CQ8N584 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.32■■□□□ 1
TTC39CQ8N584 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
TTC39CQ8N584 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
TTC39CQ8N584 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.32■■□□□ 1
TTC39CQ8N584 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TTC39CQ8N584 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.32■■□□□ 1
TTC39CQ8N584 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.32■■□□□ 1
TTC39CQ8N584 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.32■■□□□ 1
TTC39CQ8N584 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.32■■□□□ 1
TTC39CQ8N584 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TTC39CQ8N584 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TTC39CQ8N584 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
TTC39CQ8N584 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.32■■□□□ 1
TTC39CQ8N584 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
TTC39CQ8N584 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.32■■□□□ 1
TTC39CQ8N584 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.31■■□□□ 1
TTC39CQ8N584 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TTC39CQ8N584 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.31■■□□□ 1
TTC39CQ8N584 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.31■■□□□ 1
TTC39CQ8N584 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TTC39CQ8N584 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.31■■□□□ 1
TTC39CQ8N584 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TTC39CQ8N584 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TTC39CQ8N584 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.31■■□□□ 1
TTC39CQ8N584 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TTC39CQ8N584 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.31■■□□□ 1
TTC39CQ8N584 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TTC39CQ8N584 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.31■■□□□ 1
TTC39CQ8N584 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.31■■□□□ 1
TTC39CQ8N584 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.31■■□□□ 1
TTC39CQ8N584 RNA5SP413-201ENST00000516373 109 ntBASIC21.31■■□□□ 1
TTC39CQ8N584 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.31■■□□□ 1
TTC39CQ8N584 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.31■■□□□ 1
TTC39CQ8N584 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.31■■□□□ 1
TTC39CQ8N584 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TTC39CQ8N584 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TTC39CQ8N584 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.31■■□□□ 1
TTC39CQ8N584 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.31■■□□□ 1
TTC39CQ8N584 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.31■■□□□ 1
TTC39CQ8N584 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.31■■□□□ 1
TTC39CQ8N584 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TTC39CQ8N584 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.3■■□□□ 1
TTC39CQ8N584 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
TTC39CQ8N584 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.3■■□□□ 1
TTC39CQ8N584 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
TTC39CQ8N584 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
TTC39CQ8N584 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
TTC39CQ8N584 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms