Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ARHGEF39Q8N4T4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ARHGEF39Q8N4T4 AC098590.1-201ENST00000468126 897 ntBASIC18.98■□□□□ 0.63
ARHGEF39Q8N4T4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.98■□□□□ 0.63
ARHGEF39Q8N4T4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.98■□□□□ 0.63
ARHGEF39Q8N4T4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.98■□□□□ 0.63
ARHGEF39Q8N4T4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ARHGEF39Q8N4T4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ARHGEF39Q8N4T4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
ARHGEF39Q8N4T4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
ARHGEF39Q8N4T4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ARHGEF39Q8N4T4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ARHGEF39Q8N4T4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
ARHGEF39Q8N4T4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ARHGEF39Q8N4T4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
ARHGEF39Q8N4T4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ARHGEF39Q8N4T4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ARHGEF39Q8N4T4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ARHGEF39Q8N4T4 AL512408.1-201ENST00000569378 2000 ntBASIC18.97■□□□□ 0.63
ARHGEF39Q8N4T4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ARHGEF39Q8N4T4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ARHGEF39Q8N4T4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
ARHGEF39Q8N4T4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
ARHGEF39Q8N4T4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ARHGEF39Q8N4T4 HLA-G-202ENST00000376815 851 ntBASIC18.97■□□□□ 0.63
ARHGEF39Q8N4T4 HLA-G-203ENST00000376818 1127 ntBASIC18.97■□□□□ 0.63
ARHGEF39Q8N4T4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.97■□□□□ 0.63
ARHGEF39Q8N4T4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
ARHGEF39Q8N4T4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.97■□□□□ 0.63
ARHGEF39Q8N4T4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.97■□□□□ 0.63
ARHGEF39Q8N4T4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ARHGEF39Q8N4T4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ARHGEF39Q8N4T4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ARHGEF39Q8N4T4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ARHGEF39Q8N4T4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ARHGEF39Q8N4T4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ARHGEF39Q8N4T4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.97■□□□□ 0.63
ARHGEF39Q8N4T4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ARHGEF39Q8N4T4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ARHGEF39Q8N4T4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.96■□□□□ 0.63
ARHGEF39Q8N4T4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ARHGEF39Q8N4T4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
ARHGEF39Q8N4T4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ARHGEF39Q8N4T4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ARHGEF39Q8N4T4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ARHGEF39Q8N4T4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ARHGEF39Q8N4T4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
ARHGEF39Q8N4T4 KRT18P29-201ENST00000397031 1267 ntBASIC18.96■□□□□ 0.63
ARHGEF39Q8N4T4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.96■□□□□ 0.63
ARHGEF39Q8N4T4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.96■□□□□ 0.63
ARHGEF39Q8N4T4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ARHGEF39Q8N4T4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
ARHGEF39Q8N4T4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ARHGEF39Q8N4T4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
ARHGEF39Q8N4T4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
ARHGEF39Q8N4T4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ARHGEF39Q8N4T4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ARHGEF39Q8N4T4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ARHGEF39Q8N4T4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ARHGEF39Q8N4T4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ARHGEF39Q8N4T4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ARHGEF39Q8N4T4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.95■□□□□ 0.62
ARHGEF39Q8N4T4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ARHGEF39Q8N4T4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.95■□□□□ 0.62
ARHGEF39Q8N4T4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.95■□□□□ 0.62
ARHGEF39Q8N4T4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ARHGEF39Q8N4T4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ARHGEF39Q8N4T4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
ARHGEF39Q8N4T4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ARHGEF39Q8N4T4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
ARHGEF39Q8N4T4 KRT17P3-201ENST00000420566 1262 ntBASIC18.95■□□□□ 0.62
ARHGEF39Q8N4T4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ARHGEF39Q8N4T4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.95■□□□□ 0.62
ARHGEF39Q8N4T4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.95■□□□□ 0.62
ARHGEF39Q8N4T4 RPS2P52-201ENST00000469610 820 ntBASIC18.95■□□□□ 0.62
ARHGEF39Q8N4T4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.95■□□□□ 0.62
ARHGEF39Q8N4T4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.95■□□□□ 0.62
ARHGEF39Q8N4T4 MTDHP1-201ENST00000605323 784 ntBASIC18.95■□□□□ 0.62
ARHGEF39Q8N4T4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
ARHGEF39Q8N4T4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ARHGEF39Q8N4T4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.95■□□□□ 0.62
ARHGEF39Q8N4T4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ARHGEF39Q8N4T4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.95■□□□□ 0.62
ARHGEF39Q8N4T4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ARHGEF39Q8N4T4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ARHGEF39Q8N4T4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.95■□□□□ 0.62
ARHGEF39Q8N4T4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ARHGEF39Q8N4T4 AC124283.5-201ENST00000624661 1809 ntBASIC18.95■□□□□ 0.62
ARHGEF39Q8N4T4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ARHGEF39Q8N4T4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ARHGEF39Q8N4T4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.95■□□□□ 0.62
ARHGEF39Q8N4T4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.95■□□□□ 0.62
ARHGEF39Q8N4T4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ARHGEF39Q8N4T4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.94■□□□□ 0.62
ARHGEF39Q8N4T4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ARHGEF39Q8N4T4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.94■□□□□ 0.62
ARHGEF39Q8N4T4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.94■□□□□ 0.62
ARHGEF39Q8N4T4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ARHGEF39Q8N4T4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
ARHGEF39Q8N4T4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms