Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SYNPOQ8N3V7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SYNPOQ8N3V7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SYNPOQ8N3V7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.47■□□□□ 0.87
SYNPOQ8N3V7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.46■□□□□ 0.87
SYNPOQ8N3V7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SYNPOQ8N3V7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SYNPOQ8N3V7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SYNPOQ8N3V7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SYNPOQ8N3V7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
SYNPOQ8N3V7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SYNPOQ8N3V7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SYNPOQ8N3V7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SYNPOQ8N3V7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SYNPOQ8N3V7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.46■□□□□ 0.87
SYNPOQ8N3V7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.46■□□□□ 0.87
SYNPOQ8N3V7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.46■□□□□ 0.87
SYNPOQ8N3V7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SYNPOQ8N3V7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SYNPOQ8N3V7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SYNPOQ8N3V7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.46■□□□□ 0.87
SYNPOQ8N3V7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
SYNPOQ8N3V7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.46■□□□□ 0.87
SYNPOQ8N3V7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SYNPOQ8N3V7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SYNPOQ8N3V7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SYNPOQ8N3V7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SYNPOQ8N3V7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.45■□□□□ 0.86
SYNPOQ8N3V7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SYNPOQ8N3V7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SYNPOQ8N3V7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SYNPOQ8N3V7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.45■□□□□ 0.86
SYNPOQ8N3V7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
SYNPOQ8N3V7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SYNPOQ8N3V7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.45■□□□□ 0.86
SYNPOQ8N3V7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SYNPOQ8N3V7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SYNPOQ8N3V7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SYNPOQ8N3V7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SYNPOQ8N3V7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.45■□□□□ 0.86
SYNPOQ8N3V7 AC026310.3-201ENST00000625186 2373 ntBASIC20.45■□□□□ 0.86
SYNPOQ8N3V7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SYNPOQ8N3V7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SYNPOQ8N3V7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SYNPOQ8N3V7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SYNPOQ8N3V7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SYNPOQ8N3V7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SYNPOQ8N3V7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SYNPOQ8N3V7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.44■□□□□ 0.86
SYNPOQ8N3V7 AC145285.6-201ENST00000604632 637 ntBASIC20.44■□□□□ 0.86
SYNPOQ8N3V7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SYNPOQ8N3V7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.44■□□□□ 0.86
SYNPOQ8N3V7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SYNPOQ8N3V7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SYNPOQ8N3V7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.44■□□□□ 0.86
SYNPOQ8N3V7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
SYNPOQ8N3V7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SYNPOQ8N3V7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SYNPOQ8N3V7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
SYNPOQ8N3V7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.43■□□□□ 0.86
SYNPOQ8N3V7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.43■□□□□ 0.86
SYNPOQ8N3V7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SYNPOQ8N3V7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.43■□□□□ 0.86
SYNPOQ8N3V7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SYNPOQ8N3V7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.43■□□□□ 0.86
SYNPOQ8N3V7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SYNPOQ8N3V7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SYNPOQ8N3V7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SYNPOQ8N3V7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SYNPOQ8N3V7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SYNPOQ8N3V7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SYNPOQ8N3V7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SYNPOQ8N3V7 FAM197Y1-201ENST00000421178 764 ntBASIC20.43■□□□□ 0.86
SYNPOQ8N3V7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.43■□□□□ 0.86
SYNPOQ8N3V7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SYNPOQ8N3V7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.43■□□□□ 0.86
SYNPOQ8N3V7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.43■□□□□ 0.86
SYNPOQ8N3V7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.43■□□□□ 0.86
SYNPOQ8N3V7 AC092865.7-201ENST00000641832 219 ntBASIC20.43■□□□□ 0.86
SYNPOQ8N3V7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.43■□□□□ 0.86
SYNPOQ8N3V7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SYNPOQ8N3V7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SYNPOQ8N3V7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SYNPOQ8N3V7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SYNPOQ8N3V7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
SYNPOQ8N3V7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SYNPOQ8N3V7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.42■□□□□ 0.86
SYNPOQ8N3V7 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.42■□□□□ 0.86
SYNPOQ8N3V7 AL445228.2-201ENST00000605589 952 ntBASIC20.42■□□□□ 0.86
SYNPOQ8N3V7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.42■□□□□ 0.86
SYNPOQ8N3V7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SYNPOQ8N3V7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SYNPOQ8N3V7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SYNPOQ8N3V7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SYNPOQ8N3V7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SYNPOQ8N3V7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.42■□□□□ 0.86
SYNPOQ8N3V7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYNPOQ8N3V7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYNPOQ8N3V7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.41■□□□□ 0.86
SYNPOQ8N3V7 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms