Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
SMC5Q8IY18 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
SMC5Q8IY18 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
SMC5Q8IY18 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
SMC5Q8IY18 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
SMC5Q8IY18 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC24.89■■□□□ 1.58
SMC5Q8IY18 AL031963.3-201ENST00000606441 850 ntBASIC24.89■■□□□ 1.58
SMC5Q8IY18 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC24.89■■□□□ 1.58
SMC5Q8IY18 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC24.89■■□□□ 1.58
SMC5Q8IY18 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
SMC5Q8IY18 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC24.89■■□□□ 1.57
SMC5Q8IY18 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC24.89■■□□□ 1.57
SMC5Q8IY18 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC24.89■■□□□ 1.57
SMC5Q8IY18 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC24.89■■□□□ 1.57
SMC5Q8IY18 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC24.89■■□□□ 1.57
SMC5Q8IY18 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC24.89■■□□□ 1.57
SMC5Q8IY18 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SMC5Q8IY18 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SMC5Q8IY18 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SMC5Q8IY18 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
SMC5Q8IY18 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SMC5Q8IY18 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SMC5Q8IY18 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SMC5Q8IY18 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SMC5Q8IY18 TREX1-205ENST00000625293 1783 ntBASIC24.88■■□□□ 1.57
SMC5Q8IY18 KRT17P1-201ENST00000399211 1546 ntBASIC24.88■■□□□ 1.57
SMC5Q8IY18 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
SMC5Q8IY18 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC24.88■■□□□ 1.57
SMC5Q8IY18 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC24.88■■□□□ 1.57
SMC5Q8IY18 AC008694.1-202ENST00000636953 945 ntBASIC24.88■■□□□ 1.57
SMC5Q8IY18 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC24.88■■□□□ 1.57
SMC5Q8IY18 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
SMC5Q8IY18 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SMC5Q8IY18 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SMC5Q8IY18 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SMC5Q8IY18 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
SMC5Q8IY18 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC24.87■■□□□ 1.57
SMC5Q8IY18 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC24.87■■□□□ 1.57
SMC5Q8IY18 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
SMC5Q8IY18 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC24.87■■□□□ 1.57
SMC5Q8IY18 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SMC5Q8IY18 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SMC5Q8IY18 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SMC5Q8IY18 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SMC5Q8IY18 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SMC5Q8IY18 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC24.86■■□□□ 1.57
SMC5Q8IY18 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SMC5Q8IY18 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SMC5Q8IY18 AC009237.14-201ENST00000609975 1594 ntBASIC24.86■■□□□ 1.57
SMC5Q8IY18 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SMC5Q8IY18 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SMC5Q8IY18 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC24.86■■□□□ 1.57
SMC5Q8IY18 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC24.86■■□□□ 1.57
SMC5Q8IY18 AC005181.1-201ENST00000604782 1256 ntBASIC24.86■■□□□ 1.57
SMC5Q8IY18 IKBKGP1-201ENST00000612193 1073 ntBASIC24.86■■□□□ 1.57
SMC5Q8IY18 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC24.86■■□□□ 1.57
SMC5Q8IY18 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC24.86■■□□□ 1.57
SMC5Q8IY18 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SMC5Q8IY18 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SMC5Q8IY18 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC24.86■■□□□ 1.57
SMC5Q8IY18 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC24.85■■□□□ 1.57
SMC5Q8IY18 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
SMC5Q8IY18 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC24.85■■□□□ 1.57
SMC5Q8IY18 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SMC5Q8IY18 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
SMC5Q8IY18 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SMC5Q8IY18 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC24.85■■□□□ 1.57
SMC5Q8IY18 AC133552.2-202ENST00000575694 574 ntBASIC24.85■■□□□ 1.57
SMC5Q8IY18 AL050303.2-201ENST00000619798 666 ntBASIC24.85■■□□□ 1.57
SMC5Q8IY18 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
SMC5Q8IY18 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC24.85■■□□□ 1.57
SMC5Q8IY18 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SMC5Q8IY18 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SMC5Q8IY18 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SMC5Q8IY18 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SMC5Q8IY18 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SMC5Q8IY18 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC24.84■■□□□ 1.57
SMC5Q8IY18 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SMC5Q8IY18 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SMC5Q8IY18 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC24.84■■□□□ 1.57
SMC5Q8IY18 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SMC5Q8IY18 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC24.84■■□□□ 1.57
SMC5Q8IY18 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SMC5Q8IY18 RAP2CP1-201ENST00000605103 478 ntBASIC24.84■■□□□ 1.57
SMC5Q8IY18 AL589743.5-201ENST00000616611 1050 ntBASIC24.84■■□□□ 1.57
SMC5Q8IY18 AC073111.5-205ENST00000641717 521 ntBASIC24.84■■□□□ 1.57
SMC5Q8IY18 POLI-202ENST00000406285 2030 ntTSL 2 BASIC24.84■■□□□ 1.57
SMC5Q8IY18 KRT8P20-201ENST00000423953 1409 ntBASIC24.84■■□□□ 1.57
SMC5Q8IY18 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC24.84■■□□□ 1.57
SMC5Q8IY18 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC24.83■■□□□ 1.57
SMC5Q8IY18 GOLGA2P11-201ENST00000562660 1621 ntBASIC24.83■■□□□ 1.57
SMC5Q8IY18 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SMC5Q8IY18 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SMC5Q8IY18 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC24.83■■□□□ 1.57
SMC5Q8IY18 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SMC5Q8IY18 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SMC5Q8IY18 CDCA4P2-201ENST00000441182 718 ntBASIC24.83■■□□□ 1.57
SMC5Q8IY18 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SMC5Q8IY18 C2orf69P4-201ENST00000565394 541 ntBASIC24.83■■□□□ 1.57
SMC5Q8IY18 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms