Protein–RNA interactions for Protein: Q8IUF1

CBWD2, COBW domain-containing protein 2, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD2Q8IUF1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.83■■□□□ 1.09
CBWD2Q8IUF1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.83■■□□□ 1.09
CBWD2Q8IUF1 AL031963.3-201ENST00000606441 850 ntBASIC21.83■■□□□ 1.09
CBWD2Q8IUF1 HLA-B-256ENST00000639848 1089 ntBASIC21.83■■□□□ 1.09
CBWD2Q8IUF1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.83■■□□□ 1.08
CBWD2Q8IUF1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CBWD2Q8IUF1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CBWD2Q8IUF1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CBWD2Q8IUF1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CBWD2Q8IUF1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CBWD2Q8IUF1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
CBWD2Q8IUF1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
CBWD2Q8IUF1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
CBWD2Q8IUF1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CBWD2Q8IUF1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
CBWD2Q8IUF1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CBWD2Q8IUF1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CBWD2Q8IUF1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CBWD2Q8IUF1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.82■■□□□ 1.08
CBWD2Q8IUF1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.82■■□□□ 1.08
CBWD2Q8IUF1 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.82■■□□□ 1.08
CBWD2Q8IUF1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.82■■□□□ 1.08
CBWD2Q8IUF1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CBWD2Q8IUF1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.82■■□□□ 1.08
CBWD2Q8IUF1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CBWD2Q8IUF1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.82■■□□□ 1.08
CBWD2Q8IUF1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CBWD2Q8IUF1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CBWD2Q8IUF1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.82■■□□□ 1.08
CBWD2Q8IUF1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CBWD2Q8IUF1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CBWD2Q8IUF1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.82■■□□□ 1.08
CBWD2Q8IUF1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.82■■□□□ 1.08
CBWD2Q8IUF1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.82■■□□□ 1.08
CBWD2Q8IUF1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CBWD2Q8IUF1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.81■■□□□ 1.08
CBWD2Q8IUF1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CBWD2Q8IUF1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CBWD2Q8IUF1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CBWD2Q8IUF1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CBWD2Q8IUF1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CBWD2Q8IUF1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CBWD2Q8IUF1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CBWD2Q8IUF1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CBWD2Q8IUF1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CBWD2Q8IUF1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.81■■□□□ 1.08
CBWD2Q8IUF1 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.81■■□□□ 1.08
CBWD2Q8IUF1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.81■■□□□ 1.08
CBWD2Q8IUF1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.81■■□□□ 1.08
CBWD2Q8IUF1 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CBWD2Q8IUF1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.81■■□□□ 1.08
CBWD2Q8IUF1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CBWD2Q8IUF1 AC092368.3-202ENST00000574180 1591 ntBASIC21.81■■□□□ 1.08
CBWD2Q8IUF1 BX119927.1-201ENST00000636596 1552 ntBASIC21.81■■□□□ 1.08
CBWD2Q8IUF1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CBWD2Q8IUF1 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.8■■□□□ 1.08
CBWD2Q8IUF1 KRT8P20-201ENST00000423953 1409 ntBASIC21.8■■□□□ 1.08
CBWD2Q8IUF1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CBWD2Q8IUF1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
CBWD2Q8IUF1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CBWD2Q8IUF1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CBWD2Q8IUF1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CBWD2Q8IUF1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.8■■□□□ 1.08
CBWD2Q8IUF1 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CBWD2Q8IUF1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CBWD2Q8IUF1 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
CBWD2Q8IUF1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.8■■□□□ 1.08
CBWD2Q8IUF1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CBWD2Q8IUF1 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.8■■□□□ 1.08
CBWD2Q8IUF1 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.8■■□□□ 1.08
CBWD2Q8IUF1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CBWD2Q8IUF1 AC060766.5-201ENST00000590539 871 ntBASIC21.8■■□□□ 1.08
CBWD2Q8IUF1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CBWD2Q8IUF1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.8■■□□□ 1.08
CBWD2Q8IUF1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CBWD2Q8IUF1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.8■■□□□ 1.08
CBWD2Q8IUF1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CBWD2Q8IUF1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CBWD2Q8IUF1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
CBWD2Q8IUF1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CBWD2Q8IUF1 PCDHAC2-203ENST00000615316 3011 ntBASIC21.8■■□□□ 1.08
CBWD2Q8IUF1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
CBWD2Q8IUF1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CBWD2Q8IUF1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CBWD2Q8IUF1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.79■■□□□ 1.08
CBWD2Q8IUF1 PNMA6B-201ENST00000538162 1200 ntBASIC21.79■■□□□ 1.08
CBWD2Q8IUF1 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CBWD2Q8IUF1 KRT18P6-201ENST00000555540 1265 ntBASIC21.79■■□□□ 1.08
CBWD2Q8IUF1 AC005829.2-201ENST00000571422 1056 ntBASIC21.79■■□□□ 1.08
CBWD2Q8IUF1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CBWD2Q8IUF1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CBWD2Q8IUF1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CBWD2Q8IUF1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.79■■□□□ 1.08
CBWD2Q8IUF1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CBWD2Q8IUF1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.79■■□□□ 1.08
CBWD2Q8IUF1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CBWD2Q8IUF1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CBWD2Q8IUF1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
CBWD2Q8IUF1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CBWD2Q8IUF1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms