Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 HLA-G-203ENST00000376818 1127 ntBASIC25.11■■□□□ 1.61
UBE3BQ7Z3V4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
UBE3BQ7Z3V4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
UBE3BQ7Z3V4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC25.11■■□□□ 1.61
UBE3BQ7Z3V4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC25.11■■□□□ 1.61
UBE3BQ7Z3V4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC25.11■■□□□ 1.61
UBE3BQ7Z3V4 Six3os1_6.1-201ENST00000620790 196 ntBASIC25.11■■□□□ 1.61
UBE3BQ7Z3V4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
UBE3BQ7Z3V4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC25.11■■□□□ 1.61
UBE3BQ7Z3V4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
UBE3BQ7Z3V4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC25.11■■□□□ 1.61
UBE3BQ7Z3V4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
UBE3BQ7Z3V4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
UBE3BQ7Z3V4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
UBE3BQ7Z3V4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
UBE3BQ7Z3V4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC25.1■■□□□ 1.61
UBE3BQ7Z3V4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
UBE3BQ7Z3V4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC25.1■■□□□ 1.61
UBE3BQ7Z3V4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC25.1■■□□□ 1.61
UBE3BQ7Z3V4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC25.1■■□□□ 1.61
UBE3BQ7Z3V4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC25.1■■□□□ 1.61
UBE3BQ7Z3V4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC25.1■■□□□ 1.61
UBE3BQ7Z3V4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC25.1■■□□□ 1.61
UBE3BQ7Z3V4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC25.1■■□□□ 1.61
UBE3BQ7Z3V4 AC110285.5-201ENST00000611501 352 ntBASIC25.1■■□□□ 1.61
UBE3BQ7Z3V4 AL121829.2-201ENST00000620908 328 ntBASIC25.1■■□□□ 1.61
UBE3BQ7Z3V4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
UBE3BQ7Z3V4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC25.1■■□□□ 1.61
UBE3BQ7Z3V4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
UBE3BQ7Z3V4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
UBE3BQ7Z3V4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
UBE3BQ7Z3V4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
UBE3BQ7Z3V4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
UBE3BQ7Z3V4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
UBE3BQ7Z3V4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
UBE3BQ7Z3V4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
UBE3BQ7Z3V4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
UBE3BQ7Z3V4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
UBE3BQ7Z3V4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
UBE3BQ7Z3V4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC25.09■■□□□ 1.61
UBE3BQ7Z3V4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC25.09■■□□□ 1.61
UBE3BQ7Z3V4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC25.09■■□□□ 1.61
UBE3BQ7Z3V4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
UBE3BQ7Z3V4 AC092720.2-201ENST00000602388 1665 ntBASIC25.09■■□□□ 1.61
UBE3BQ7Z3V4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
UBE3BQ7Z3V4 KRT8P17-201ENST00000453110 1448 ntBASIC25.09■■□□□ 1.61
UBE3BQ7Z3V4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
UBE3BQ7Z3V4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC25.09■■□□□ 1.61
UBE3BQ7Z3V4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
UBE3BQ7Z3V4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC25.09■■□□□ 1.61
UBE3BQ7Z3V4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
UBE3BQ7Z3V4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
UBE3BQ7Z3V4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
UBE3BQ7Z3V4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
UBE3BQ7Z3V4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC25.08■■□□□ 1.61
UBE3BQ7Z3V4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC25.08■■□□□ 1.61
UBE3BQ7Z3V4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
UBE3BQ7Z3V4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
UBE3BQ7Z3V4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC25.07■■□□□ 1.6
UBE3BQ7Z3V4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC25.07■■□□□ 1.6
UBE3BQ7Z3V4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC25.07■■□□□ 1.6
UBE3BQ7Z3V4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
UBE3BQ7Z3V4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
UBE3BQ7Z3V4 MIR718-201ENST00000390190 70 ntBASIC25.07■■□□□ 1.6
UBE3BQ7Z3V4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC25.07■■□□□ 1.6
UBE3BQ7Z3V4 PRKY-204ENST00000533551 1019 ntBASIC25.07■■□□□ 1.6
UBE3BQ7Z3V4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC25.07■■□□□ 1.6
UBE3BQ7Z3V4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC25.07■■□□□ 1.6
UBE3BQ7Z3V4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC25.07■■□□□ 1.6
UBE3BQ7Z3V4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC25.07■■□□□ 1.6
UBE3BQ7Z3V4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC25.07■■□□□ 1.6
UBE3BQ7Z3V4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC25.07■■□□□ 1.6
UBE3BQ7Z3V4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
UBE3BQ7Z3V4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC25.06■■□□□ 1.6
UBE3BQ7Z3V4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC25.06■■□□□ 1.6
UBE3BQ7Z3V4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC25.06■■□□□ 1.6
UBE3BQ7Z3V4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
UBE3BQ7Z3V4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
UBE3BQ7Z3V4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
UBE3BQ7Z3V4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC25.06■■□□□ 1.6
UBE3BQ7Z3V4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
UBE3BQ7Z3V4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
UBE3BQ7Z3V4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
UBE3BQ7Z3V4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
UBE3BQ7Z3V4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
UBE3BQ7Z3V4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC25.06■■□□□ 1.6
UBE3BQ7Z3V4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
UBE3BQ7Z3V4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
UBE3BQ7Z3V4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
UBE3BQ7Z3V4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
UBE3BQ7Z3V4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC25.05■■□□□ 1.6
UBE3BQ7Z3V4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
UBE3BQ7Z3V4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
UBE3BQ7Z3V4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
UBE3BQ7Z3V4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC25.05■■□□□ 1.6
UBE3BQ7Z3V4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
UBE3BQ7Z3V4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC25.05■■□□□ 1.6
UBE3BQ7Z3V4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC25.05■■□□□ 1.6
UBE3BQ7Z3V4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC25.05■■□□□ 1.6
UBE3BQ7Z3V4 PNN-205ENST00000556530 601 ntTSL 2 BASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms