Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LCA10Q71F78 LINC01126-201ENST00000623515 1646 ntBASIC10.8□□□□□ -0.68
LCA10Q71F78 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
LCA10Q71F78 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LCA10Q71F78 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC10.8□□□□□ -0.68
LCA10Q71F78 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC10.8□□□□□ -0.68
LCA10Q71F78 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
LCA10Q71F78 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LCA10Q71F78 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
LCA10Q71F78 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LCA10Q71F78 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LCA10Q71F78 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
LCA10Q71F78 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC10.8□□□□□ -0.68
LCA10Q71F78 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LCA10Q71F78 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LCA10Q71F78 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC10.8□□□□□ -0.68
LCA10Q71F78 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC10.8□□□□□ -0.68
LCA10Q71F78 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
LCA10Q71F78 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LCA10Q71F78 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC10.8□□□□□ -0.68
LCA10Q71F78 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LCA10Q71F78 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
LCA10Q71F78 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC10.8□□□□□ -0.68
LCA10Q71F78 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LCA10Q71F78 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LCA10Q71F78 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LCA10Q71F78 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC10.8□□□□□ -0.68
LCA10Q71F78 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LCA10Q71F78 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LCA10Q71F78 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LCA10Q71F78 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LCA10Q71F78 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC10.8□□□□□ -0.68
LCA10Q71F78 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC10.8□□□□□ -0.68
LCA10Q71F78 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LCA10Q71F78 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC10.8□□□□□ -0.68
LCA10Q71F78 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
LCA10Q71F78 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LCA10Q71F78 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LCA10Q71F78 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
LCA10Q71F78 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
LCA10Q71F78 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LCA10Q71F78 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LCA10Q71F78 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC10.8□□□□□ -0.68
LCA10Q71F78 AC004687.1-201ENST00000579003 1625 ntBASIC10.8□□□□□ -0.68
LCA10Q71F78 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LCA10Q71F78 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC10.8□□□□□ -0.68
LCA10Q71F78 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LCA10Q71F78 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LCA10Q71F78 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LCA10Q71F78 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC10.79□□□□□ -0.68
LCA10Q71F78 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC10.79□□□□□ -0.68
LCA10Q71F78 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LCA10Q71F78 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
LCA10Q71F78 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC10.79□□□□□ -0.68
LCA10Q71F78 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LCA10Q71F78 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LCA10Q71F78 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
LCA10Q71F78 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LCA10Q71F78 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
LCA10Q71F78 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LCA10Q71F78 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
LCA10Q71F78 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
LCA10Q71F78 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LCA10Q71F78 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LCA10Q71F78 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LCA10Q71F78 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC10.79□□□□□ -0.68
LCA10Q71F78 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC10.79□□□□□ -0.68
LCA10Q71F78 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
LCA10Q71F78 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC10.79□□□□□ -0.68
LCA10Q71F78 DUX4L4-201ENST00000566884 1269 ntBASIC10.79□□□□□ -0.68
LCA10Q71F78 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
LCA10Q71F78 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
LCA10Q71F78 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
LCA10Q71F78 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
LCA10Q71F78 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LCA10Q71F78 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LCA10Q71F78 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
LCA10Q71F78 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LCA10Q71F78 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LCA10Q71F78 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LCA10Q71F78 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
LCA10Q71F78 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LCA10Q71F78 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LCA10Q71F78 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LCA10Q71F78 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LCA10Q71F78 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
LCA10Q71F78 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LCA10Q71F78 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
LCA10Q71F78 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LCA10Q71F78 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC10.79□□□□□ -0.68
LCA10Q71F78 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LCA10Q71F78 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LCA10Q71F78 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC10.78□□□□□ -0.68
LCA10Q71F78 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC10.78□□□□□ -0.68
LCA10Q71F78 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC10.78□□□□□ -0.68
LCA10Q71F78 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LCA10Q71F78 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC10.78□□□□□ -0.68
LCA10Q71F78 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LCA10Q71F78 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LCA10Q71F78 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms