Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC149Q6ZUS6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC149Q6ZUS6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC149Q6ZUS6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC149Q6ZUS6 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC149Q6ZUS6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC149Q6ZUS6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC149Q6ZUS6 AL024507.2-201ENST00000606070 2574 ntBASIC21.16■□□□□ 0.98
CCDC149Q6ZUS6 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC149Q6ZUS6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC149Q6ZUS6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC149Q6ZUS6 NBPF21P-201ENST00000425093 1451 ntBASIC21.16■□□□□ 0.98
CCDC149Q6ZUS6 HTR7P1-201ENST00000538670 1336 ntBASIC21.16■□□□□ 0.98
CCDC149Q6ZUS6 MMP23A-201ENST00000234610 1017 ntBASIC21.16■□□□□ 0.98
CCDC149Q6ZUS6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC149Q6ZUS6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC149Q6ZUS6 AL353807.1-201ENST00000427475 662 ntBASIC21.16■□□□□ 0.98
CCDC149Q6ZUS6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC149Q6ZUS6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC149Q6ZUS6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.16■□□□□ 0.98
CCDC149Q6ZUS6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.16■□□□□ 0.98
CCDC149Q6ZUS6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC149Q6ZUS6 AL445228.2-201ENST00000605589 952 ntBASIC21.16■□□□□ 0.98
CCDC149Q6ZUS6 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.16■□□□□ 0.98
CCDC149Q6ZUS6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC149Q6ZUS6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC149Q6ZUS6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CCDC149Q6ZUS6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC149Q6ZUS6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC149Q6ZUS6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC149Q6ZUS6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC149Q6ZUS6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC149Q6ZUS6 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
CCDC149Q6ZUS6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC149Q6ZUS6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC149Q6ZUS6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.15■□□□□ 0.98
CCDC149Q6ZUS6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC149Q6ZUS6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC149Q6ZUS6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC149Q6ZUS6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC149Q6ZUS6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC149Q6ZUS6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CCDC149Q6ZUS6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC149Q6ZUS6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CCDC149Q6ZUS6 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC149Q6ZUS6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CCDC149Q6ZUS6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC149Q6ZUS6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.15■□□□□ 0.98
CCDC149Q6ZUS6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC149Q6ZUS6 RN7SL850P-201ENST00000579959 291 ntBASIC21.15■□□□□ 0.98
CCDC149Q6ZUS6 AF186192.3-201ENST00000583427 947 ntBASIC21.15■□□□□ 0.98
CCDC149Q6ZUS6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CCDC149Q6ZUS6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CCDC149Q6ZUS6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC149Q6ZUS6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC149Q6ZUS6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.14■□□□□ 0.98
CCDC149Q6ZUS6 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
CCDC149Q6ZUS6 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
CCDC149Q6ZUS6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC149Q6ZUS6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC149Q6ZUS6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC149Q6ZUS6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CCDC149Q6ZUS6 AC124283.5-201ENST00000624661 1809 ntBASIC21.14■□□□□ 0.97
CCDC149Q6ZUS6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC149Q6ZUS6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC149Q6ZUS6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.14■□□□□ 0.97
CCDC149Q6ZUS6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC149Q6ZUS6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.14■□□□□ 0.97
CCDC149Q6ZUS6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC149Q6ZUS6 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC149Q6ZUS6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC149Q6ZUS6 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC149Q6ZUS6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC149Q6ZUS6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CCDC149Q6ZUS6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC149Q6ZUS6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC149Q6ZUS6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC149Q6ZUS6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
CCDC149Q6ZUS6 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC149Q6ZUS6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC149Q6ZUS6 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC149Q6ZUS6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.13■□□□□ 0.97
CCDC149Q6ZUS6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC149Q6ZUS6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC149Q6ZUS6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC149Q6ZUS6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CCDC149Q6ZUS6 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC149Q6ZUS6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC149Q6ZUS6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC149Q6ZUS6 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC149Q6ZUS6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC149Q6ZUS6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
CCDC149Q6ZUS6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CCDC149Q6ZUS6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC149Q6ZUS6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC149Q6ZUS6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC149Q6ZUS6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC149Q6ZUS6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.12■□□□□ 0.97
CCDC149Q6ZUS6 AC004264.1-201ENST00000608354 794 ntBASIC21.12■□□□□ 0.97
CCDC149Q6ZUS6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms