Protein–RNA interactions for Protein: Q6WKZ4

RAB11FIP1, Rab11 family-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1Q6WKZ4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.22■□□□□ 0.83
RAB11FIP1Q6WKZ4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB11FIP1Q6WKZ4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.22■□□□□ 0.83
RAB11FIP1Q6WKZ4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RAB11FIP1Q6WKZ4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB11FIP1Q6WKZ4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.21■□□□□ 0.83
RAB11FIP1Q6WKZ4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB11FIP1Q6WKZ4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB11FIP1Q6WKZ4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.21■□□□□ 0.83
RAB11FIP1Q6WKZ4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB11FIP1Q6WKZ4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.21■□□□□ 0.83
RAB11FIP1Q6WKZ4 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.21■□□□□ 0.83
RAB11FIP1Q6WKZ4 AC023632.3-201ENST00000521633 145 ntBASIC20.21■□□□□ 0.83
RAB11FIP1Q6WKZ4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.21■□□□□ 0.83
RAB11FIP1Q6WKZ4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.21■□□□□ 0.83
RAB11FIP1Q6WKZ4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.21■□□□□ 0.83
RAB11FIP1Q6WKZ4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
RAB11FIP1Q6WKZ4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.21■□□□□ 0.83
RAB11FIP1Q6WKZ4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.21■□□□□ 0.83
RAB11FIP1Q6WKZ4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB11FIP1Q6WKZ4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.2■□□□□ 0.82
RAB11FIP1Q6WKZ4 AC026310.3-201ENST00000625186 2373 ntBASIC20.2■□□□□ 0.82
RAB11FIP1Q6WKZ4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB11FIP1Q6WKZ4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB11FIP1Q6WKZ4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAB11FIP1Q6WKZ4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
RAB11FIP1Q6WKZ4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RAB11FIP1Q6WKZ4 MIR718-201ENST00000390190 70 ntBASIC20.2■□□□□ 0.82
RAB11FIP1Q6WKZ4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.2■□□□□ 0.82
RAB11FIP1Q6WKZ4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.2■□□□□ 0.82
RAB11FIP1Q6WKZ4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.2■□□□□ 0.82
RAB11FIP1Q6WKZ4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
RAB11FIP1Q6WKZ4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAB11FIP1Q6WKZ4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB11FIP1Q6WKZ4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RAB11FIP1Q6WKZ4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.2■□□□□ 0.82
RAB11FIP1Q6WKZ4 AL121603.2-201ENST00000557373 2117 ntBASIC20.2■□□□□ 0.82
RAB11FIP1Q6WKZ4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB11FIP1Q6WKZ4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB11FIP1Q6WKZ4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB11FIP1Q6WKZ4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RAB11FIP1Q6WKZ4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.19■□□□□ 0.82
RAB11FIP1Q6WKZ4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB11FIP1Q6WKZ4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.19■□□□□ 0.82
RAB11FIP1Q6WKZ4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB11FIP1Q6WKZ4 AC239809.2-201ENST00000415381 517 ntBASIC20.19■□□□□ 0.82
RAB11FIP1Q6WKZ4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.19■□□□□ 0.82
RAB11FIP1Q6WKZ4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.19■□□□□ 0.82
RAB11FIP1Q6WKZ4 Z99916.2-201ENST00000604037 246 ntBASIC20.19■□□□□ 0.82
RAB11FIP1Q6WKZ4 AC124016.1-201ENST00000609552 612 ntBASIC20.19■□□□□ 0.82
RAB11FIP1Q6WKZ4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB11FIP1Q6WKZ4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RAB11FIP1Q6WKZ4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.18■□□□□ 0.82
RAB11FIP1Q6WKZ4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB11FIP1Q6WKZ4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB11FIP1Q6WKZ4 KRASP1-201ENST00000407852 552 ntBASIC20.18■□□□□ 0.82
RAB11FIP1Q6WKZ4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.18■□□□□ 0.82
RAB11FIP1Q6WKZ4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.18■□□□□ 0.82
RAB11FIP1Q6WKZ4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.18■□□□□ 0.82
RAB11FIP1Q6WKZ4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB11FIP1Q6WKZ4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAB11FIP1Q6WKZ4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB11FIP1Q6WKZ4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB11FIP1Q6WKZ4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB11FIP1Q6WKZ4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB11FIP1Q6WKZ4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB11FIP1Q6WKZ4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB11FIP1Q6WKZ4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB11FIP1Q6WKZ4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.17■□□□□ 0.82
RAB11FIP1Q6WKZ4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.17■□□□□ 0.82
RAB11FIP1Q6WKZ4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB11FIP1Q6WKZ4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB11FIP1Q6WKZ4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB11FIP1Q6WKZ4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB11FIP1Q6WKZ4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.17■□□□□ 0.82
RAB11FIP1Q6WKZ4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB11FIP1Q6WKZ4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
RAB11FIP1Q6WKZ4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
RAB11FIP1Q6WKZ4 FP700111.2-201ENST00000619190 1892 ntBASIC20.17■□□□□ 0.82
RAB11FIP1Q6WKZ4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB11FIP1Q6WKZ4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
RAB11FIP1Q6WKZ4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP1Q6WKZ4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP1Q6WKZ4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP1Q6WKZ4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP1Q6WKZ4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP1Q6WKZ4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP1Q6WKZ4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RAB11FIP1Q6WKZ4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RAB11FIP1Q6WKZ4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.16■□□□□ 0.82
RAB11FIP1Q6WKZ4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP1Q6WKZ4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.16■□□□□ 0.82
RAB11FIP1Q6WKZ4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.16■□□□□ 0.82
RAB11FIP1Q6WKZ4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.16■□□□□ 0.82
RAB11FIP1Q6WKZ4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.16■□□□□ 0.82
RAB11FIP1Q6WKZ4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
RAB11FIP1Q6WKZ4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP1Q6WKZ4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
RAB11FIP1Q6WKZ4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.16■□□□□ 0.82
RAB11FIP1Q6WKZ4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms