Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 AC096631.2-201ENST00000436136 790 ntBASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 AC110285.6-201ENST00000617652 491 ntBASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 C17orf82-201ENST00000623772 1530 ntBASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDPF1Q6NVV7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDPF1Q6NVV7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CDPF1Q6NVV7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDPF1Q6NVV7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDPF1Q6NVV7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDPF1Q6NVV7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDPF1Q6NVV7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDPF1Q6NVV7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CDPF1Q6NVV7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CDPF1Q6NVV7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CDPF1Q6NVV7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDPF1Q6NVV7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDPF1Q6NVV7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CDPF1Q6NVV7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDPF1Q6NVV7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CDPF1Q6NVV7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDPF1Q6NVV7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDPF1Q6NVV7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC15.21■□□□□ 0.03
CDPF1Q6NVV7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC15.21■□□□□ 0.03
CDPF1Q6NVV7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDPF1Q6NVV7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDPF1Q6NVV7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CDPF1Q6NVV7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CDPF1Q6NVV7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC15.21■□□□□ 0.03
CDPF1Q6NVV7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDPF1Q6NVV7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CDPF1Q6NVV7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC15.21■□□□□ 0.03
CDPF1Q6NVV7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC15.21■□□□□ 0.03
CDPF1Q6NVV7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDPF1Q6NVV7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDPF1Q6NVV7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDPF1Q6NVV7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDPF1Q6NVV7 AC141586.5-201ENST00000624546 2050 ntBASIC15.21■□□□□ 0.03
CDPF1Q6NVV7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDPF1Q6NVV7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDPF1Q6NVV7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC15.21■□□□□ 0.02
CDPF1Q6NVV7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDPF1Q6NVV7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 AL512631.2-201ENST00000604634 923 ntBASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 MIR4466-201ENST00000606121 54 ntBASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 AC005837.3-201ENST00000612163 286 ntBASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDPF1Q6NVV7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms