Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PPP4R4Q6NUP7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PPP4R4Q6NUP7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.18■□□□□ 0.66
PPP4R4Q6NUP7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.18■□□□□ 0.66
PPP4R4Q6NUP7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PPP4R4Q6NUP7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.18■□□□□ 0.66
PPP4R4Q6NUP7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PPP4R4Q6NUP7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.18■□□□□ 0.66
PPP4R4Q6NUP7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.18■□□□□ 0.66
PPP4R4Q6NUP7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
PPP4R4Q6NUP7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.18■□□□□ 0.66
PPP4R4Q6NUP7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.18■□□□□ 0.66
PPP4R4Q6NUP7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.18■□□□□ 0.66
PPP4R4Q6NUP7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PPP4R4Q6NUP7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.18■□□□□ 0.66
PPP4R4Q6NUP7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.18■□□□□ 0.66
PPP4R4Q6NUP7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PPP4R4Q6NUP7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PPP4R4Q6NUP7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PPP4R4Q6NUP7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.18■□□□□ 0.66
PPP4R4Q6NUP7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.18■□□□□ 0.66
PPP4R4Q6NUP7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PPP4R4Q6NUP7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PPP4R4Q6NUP7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PPP4R4Q6NUP7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.17■□□□□ 0.66
PPP4R4Q6NUP7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PPP4R4Q6NUP7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.17■□□□□ 0.66
PPP4R4Q6NUP7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
PPP4R4Q6NUP7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPP4R4Q6NUP7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPP4R4Q6NUP7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PPP4R4Q6NUP7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPP4R4Q6NUP7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.17■□□□□ 0.66
PPP4R4Q6NUP7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.17■□□□□ 0.66
PPP4R4Q6NUP7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PPP4R4Q6NUP7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.17■□□□□ 0.66
PPP4R4Q6NUP7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PPP4R4Q6NUP7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPP4R4Q6NUP7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPP4R4Q6NUP7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPP4R4Q6NUP7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.17■□□□□ 0.66
PPP4R4Q6NUP7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.17■□□□□ 0.66
PPP4R4Q6NUP7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
PPP4R4Q6NUP7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPP4R4Q6NUP7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPP4R4Q6NUP7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPP4R4Q6NUP7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PPP4R4Q6NUP7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPP4R4Q6NUP7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPP4R4Q6NUP7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PPP4R4Q6NUP7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PPP4R4Q6NUP7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
PPP4R4Q6NUP7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.16■□□□□ 0.66
PPP4R4Q6NUP7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PPP4R4Q6NUP7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PPP4R4Q6NUP7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PPP4R4Q6NUP7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.16■□□□□ 0.66
PPP4R4Q6NUP7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.16■□□□□ 0.66
PPP4R4Q6NUP7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.16■□□□□ 0.66
PPP4R4Q6NUP7 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.16■□□□□ 0.66
PPP4R4Q6NUP7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.16■□□□□ 0.66
PPP4R4Q6NUP7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.16■□□□□ 0.66
PPP4R4Q6NUP7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PPP4R4Q6NUP7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PPP4R4Q6NUP7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PPP4R4Q6NUP7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PPP4R4Q6NUP7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.16■□□□□ 0.66
PPP4R4Q6NUP7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PPP4R4Q6NUP7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PPP4R4Q6NUP7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PPP4R4Q6NUP7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.16■□□□□ 0.66
PPP4R4Q6NUP7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PPP4R4Q6NUP7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PPP4R4Q6NUP7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PPP4R4Q6NUP7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.15■□□□□ 0.66
PPP4R4Q6NUP7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PPP4R4Q6NUP7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PPP4R4Q6NUP7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PPP4R4Q6NUP7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PPP4R4Q6NUP7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.15■□□□□ 0.66
PPP4R4Q6NUP7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.15■□□□□ 0.66
PPP4R4Q6NUP7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
PPP4R4Q6NUP7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.15■□□□□ 0.66
PPP4R4Q6NUP7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PPP4R4Q6NUP7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PPP4R4Q6NUP7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PPP4R4Q6NUP7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.15■□□□□ 0.66
PPP4R4Q6NUP7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PPP4R4Q6NUP7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PPP4R4Q6NUP7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PPP4R4Q6NUP7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PPP4R4Q6NUP7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
PPP4R4Q6NUP7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.14■□□□□ 0.66
PPP4R4Q6NUP7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PPP4R4Q6NUP7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
PPP4R4Q6NUP7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
PPP4R4Q6NUP7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PPP4R4Q6NUP7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PPP4R4Q6NUP7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.14■□□□□ 0.65
PPP4R4Q6NUP7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms