Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.82■□□□□ 0.92
PTCRAQ6ISU1 AL121956.5-201ENST00000625261 221 ntBASIC20.82■□□□□ 0.92
PTCRAQ6ISU1 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.82■□□□□ 0.92
PTCRAQ6ISU1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.82■□□□□ 0.92
PTCRAQ6ISU1 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTCRAQ6ISU1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.82■□□□□ 0.92
PTCRAQ6ISU1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTCRAQ6ISU1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
PTCRAQ6ISU1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTCRAQ6ISU1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTCRAQ6ISU1 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTCRAQ6ISU1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTCRAQ6ISU1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTCRAQ6ISU1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTCRAQ6ISU1 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTCRAQ6ISU1 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTCRAQ6ISU1 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTCRAQ6ISU1 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTCRAQ6ISU1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.81■□□□□ 0.92
PTCRAQ6ISU1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.81■□□□□ 0.92
PTCRAQ6ISU1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTCRAQ6ISU1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTCRAQ6ISU1 CLEC4GP1-201ENST00000596555 870 ntBASIC20.81■□□□□ 0.92
PTCRAQ6ISU1 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.81■□□□□ 0.92
PTCRAQ6ISU1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.81■□□□□ 0.92
PTCRAQ6ISU1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTCRAQ6ISU1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTCRAQ6ISU1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTCRAQ6ISU1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTCRAQ6ISU1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTCRAQ6ISU1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.81■□□□□ 0.92
PTCRAQ6ISU1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTCRAQ6ISU1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PTCRAQ6ISU1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.8■□□□□ 0.92
PTCRAQ6ISU1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTCRAQ6ISU1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTCRAQ6ISU1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTCRAQ6ISU1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTCRAQ6ISU1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.8■□□□□ 0.92
PTCRAQ6ISU1 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTCRAQ6ISU1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.8■□□□□ 0.92
PTCRAQ6ISU1 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTCRAQ6ISU1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.8■□□□□ 0.92
PTCRAQ6ISU1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.8■□□□□ 0.92
PTCRAQ6ISU1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTCRAQ6ISU1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.8■□□□□ 0.92
PTCRAQ6ISU1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.8■□□□□ 0.92
PTCRAQ6ISU1 AL445675.2-201ENST00000620291 557 ntBASIC20.8■□□□□ 0.92
PTCRAQ6ISU1 AL691432.3-201ENST00000621860 400 ntBASIC20.8■□□□□ 0.92
PTCRAQ6ISU1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.8■□□□□ 0.92
PTCRAQ6ISU1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTCRAQ6ISU1 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTCRAQ6ISU1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
PTCRAQ6ISU1 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PTCRAQ6ISU1 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.8■□□□□ 0.92
PTCRAQ6ISU1 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PTCRAQ6ISU1 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.79■□□□□ 0.92
PTCRAQ6ISU1 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTCRAQ6ISU1 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PTCRAQ6ISU1 AC011506.1-201ENST00000474329 610 ntBASIC20.79■□□□□ 0.92
PTCRAQ6ISU1 COX11P1-201ENST00000489116 835 ntBASIC20.79■□□□□ 0.92
PTCRAQ6ISU1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.79■□□□□ 0.92
PTCRAQ6ISU1 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.79■□□□□ 0.92
PTCRAQ6ISU1 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.79■□□□□ 0.92
PTCRAQ6ISU1 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTCRAQ6ISU1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.79■□□□□ 0.92
PTCRAQ6ISU1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTCRAQ6ISU1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
PTCRAQ6ISU1 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTCRAQ6ISU1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTCRAQ6ISU1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTCRAQ6ISU1 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PTCRAQ6ISU1 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.78■□□□□ 0.92
PTCRAQ6ISU1 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.78■□□□□ 0.92
PTCRAQ6ISU1 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.78■□□□□ 0.92
PTCRAQ6ISU1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.78■□□□□ 0.92
PTCRAQ6ISU1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PTCRAQ6ISU1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
PTCRAQ6ISU1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTCRAQ6ISU1 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTCRAQ6ISU1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.78■□□□□ 0.92
PTCRAQ6ISU1 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTCRAQ6ISU1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTCRAQ6ISU1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTCRAQ6ISU1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.77■□□□□ 0.92
PTCRAQ6ISU1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTCRAQ6ISU1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTCRAQ6ISU1 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTCRAQ6ISU1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTCRAQ6ISU1 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.77■□□□□ 0.92
PTCRAQ6ISU1 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
PTCRAQ6ISU1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
PTCRAQ6ISU1 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.77■□□□□ 0.92
PTCRAQ6ISU1 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTCRAQ6ISU1 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTCRAQ6ISU1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTCRAQ6ISU1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
PTCRAQ6ISU1 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTCRAQ6ISU1 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PTCRAQ6ISU1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms