Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTL6Q6ICC9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RTL6Q6ICC9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RTL6Q6ICC9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.11■□□□□ 0.49
RTL6Q6ICC9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTL6Q6ICC9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTL6Q6ICC9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
RTL6Q6ICC9 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTL6Q6ICC9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.1■□□□□ 0.49
RTL6Q6ICC9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
RTL6Q6ICC9 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RTL6Q6ICC9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RTL6Q6ICC9 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTL6Q6ICC9 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTL6Q6ICC9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTL6Q6ICC9 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RTL6Q6ICC9 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.1■□□□□ 0.49
RTL6Q6ICC9 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
RTL6Q6ICC9 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RTL6Q6ICC9 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RTL6Q6ICC9 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.1■□□□□ 0.49
RTL6Q6ICC9 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.1■□□□□ 0.49
RTL6Q6ICC9 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.1■□□□□ 0.49
RTL6Q6ICC9 MTDHP1-201ENST00000605323 784 ntBASIC18.1■□□□□ 0.49
RTL6Q6ICC9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RTL6Q6ICC9 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RTL6Q6ICC9 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.1■□□□□ 0.49
RTL6Q6ICC9 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RTL6Q6ICC9 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.1■□□□□ 0.49
RTL6Q6ICC9 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RTL6Q6ICC9 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RTL6Q6ICC9 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RTL6Q6ICC9 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTL6Q6ICC9 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.09■□□□□ 0.49
RTL6Q6ICC9 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RTL6Q6ICC9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RTL6Q6ICC9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RTL6Q6ICC9 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTL6Q6ICC9 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTL6Q6ICC9 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.09■□□□□ 0.49
RTL6Q6ICC9 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RTL6Q6ICC9 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RTL6Q6ICC9 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RTL6Q6ICC9 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.09■□□□□ 0.49
RTL6Q6ICC9 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.09■□□□□ 0.49
RTL6Q6ICC9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
RTL6Q6ICC9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RTL6Q6ICC9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RTL6Q6ICC9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
RTL6Q6ICC9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTL6Q6ICC9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RTL6Q6ICC9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RTL6Q6ICC9 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
RTL6Q6ICC9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RTL6Q6ICC9 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RTL6Q6ICC9 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RTL6Q6ICC9 LINC01521-201ENST00000504184 1943 ntBASIC18.08■□□□□ 0.49
RTL6Q6ICC9 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
RTL6Q6ICC9 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.08■□□□□ 0.49
RTL6Q6ICC9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.08■□□□□ 0.48
RTL6Q6ICC9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
RTL6Q6ICC9 MIR718-201ENST00000390190 70 ntBASIC18.08■□□□□ 0.48
RTL6Q6ICC9 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.08■□□□□ 0.48
RTL6Q6ICC9 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
RTL6Q6ICC9 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RTL6Q6ICC9 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
RTL6Q6ICC9 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.08■□□□□ 0.48
RTL6Q6ICC9 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RTL6Q6ICC9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.08■□□□□ 0.48
RTL6Q6ICC9 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.08■□□□□ 0.48
RTL6Q6ICC9 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.08■□□□□ 0.48
RTL6Q6ICC9 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RTL6Q6ICC9 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.08■□□□□ 0.48
RTL6Q6ICC9 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RTL6Q6ICC9 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTL6Q6ICC9 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTL6Q6ICC9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
RTL6Q6ICC9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTL6Q6ICC9 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTL6Q6ICC9 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RTL6Q6ICC9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTL6Q6ICC9 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTL6Q6ICC9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTL6Q6ICC9 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.07■□□□□ 0.48
RTL6Q6ICC9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.07■□□□□ 0.48
RTL6Q6ICC9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTL6Q6ICC9 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTL6Q6ICC9 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTL6Q6ICC9 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTL6Q6ICC9 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.07■□□□□ 0.48
RTL6Q6ICC9 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.07■□□□□ 0.48
RTL6Q6ICC9 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.07■□□□□ 0.48
RTL6Q6ICC9 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RTL6Q6ICC9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RTL6Q6ICC9 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.07■□□□□ 0.48
RTL6Q6ICC9 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.07■□□□□ 0.48
RTL6Q6ICC9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.07■□□□□ 0.48
RTL6Q6ICC9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.07■□□□□ 0.48
RTL6Q6ICC9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RTL6Q6ICC9 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms