Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.08■□□□□ 0.32
ARFGEF3Q5TH69 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARFGEF3Q5TH69 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.08■□□□□ 0.32
ARFGEF3Q5TH69 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARFGEF3Q5TH69 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARFGEF3Q5TH69 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARFGEF3Q5TH69 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARFGEF3Q5TH69 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
ARFGEF3Q5TH69 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.08■□□□□ 0.32
ARFGEF3Q5TH69 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ARFGEF3Q5TH69 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ARFGEF3Q5TH69 RN7SL471P-201ENST00000580476 299 ntBASIC17.08■□□□□ 0.32
ARFGEF3Q5TH69 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
ARFGEF3Q5TH69 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.08■□□□□ 0.32
ARFGEF3Q5TH69 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARFGEF3Q5TH69 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ARFGEF3Q5TH69 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ARFGEF3Q5TH69 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ARFGEF3Q5TH69 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARFGEF3Q5TH69 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ARFGEF3Q5TH69 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
ARFGEF3Q5TH69 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARFGEF3Q5TH69 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.07■□□□□ 0.32
ARFGEF3Q5TH69 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARFGEF3Q5TH69 KRASP1-201ENST00000407852 552 ntBASIC17.07■□□□□ 0.32
ARFGEF3Q5TH69 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.07■□□□□ 0.32
ARFGEF3Q5TH69 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ARFGEF3Q5TH69 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.07■□□□□ 0.32
ARFGEF3Q5TH69 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARFGEF3Q5TH69 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARFGEF3Q5TH69 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ARFGEF3Q5TH69 FP700111.2-201ENST00000619190 1892 ntBASIC17.07■□□□□ 0.32
ARFGEF3Q5TH69 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARFGEF3Q5TH69 MIR718-201ENST00000390190 70 ntBASIC17.06■□□□□ 0.32
ARFGEF3Q5TH69 AL390719.1-204ENST00000412397 1219 ntBASIC17.06■□□□□ 0.32
ARFGEF3Q5TH69 AL355075.4-201ENST00000554988 638 ntBASIC17.06■□□□□ 0.32
ARFGEF3Q5TH69 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARFGEF3Q5TH69 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
ARFGEF3Q5TH69 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.06■□□□□ 0.32
ARFGEF3Q5TH69 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ARFGEF3Q5TH69 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
ARFGEF3Q5TH69 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
ARFGEF3Q5TH69 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ARFGEF3Q5TH69 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARFGEF3Q5TH69 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
ARFGEF3Q5TH69 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ARFGEF3Q5TH69 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARFGEF3Q5TH69 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
ARFGEF3Q5TH69 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARFGEF3Q5TH69 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
ARFGEF3Q5TH69 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.06■□□□□ 0.32
ARFGEF3Q5TH69 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
ARFGEF3Q5TH69 AC005229.4-201ENST00000610085 2198 ntBASIC17.06■□□□□ 0.32
ARFGEF3Q5TH69 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARFGEF3Q5TH69 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARFGEF3Q5TH69 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARFGEF3Q5TH69 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARFGEF3Q5TH69 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ARFGEF3Q5TH69 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
ARFGEF3Q5TH69 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.05■□□□□ 0.32
ARFGEF3Q5TH69 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ARFGEF3Q5TH69 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ARFGEF3Q5TH69 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ARFGEF3Q5TH69 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
ARFGEF3Q5TH69 AC023632.3-201ENST00000521633 145 ntBASIC17.05■□□□□ 0.32
ARFGEF3Q5TH69 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.05■□□□□ 0.32
ARFGEF3Q5TH69 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.05■□□□□ 0.32
ARFGEF3Q5TH69 Z99916.2-201ENST00000604037 246 ntBASIC17.05■□□□□ 0.32
ARFGEF3Q5TH69 AL049637.2-201ENST00000641778 930 ntBASIC17.05■□□□□ 0.32
ARFGEF3Q5TH69 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ARFGEF3Q5TH69 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.05■□□□□ 0.32
ARFGEF3Q5TH69 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ARFGEF3Q5TH69 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.05■□□□□ 0.32
ARFGEF3Q5TH69 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.05■□□□□ 0.32
ARFGEF3Q5TH69 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
ARFGEF3Q5TH69 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.05■□□□□ 0.32
ARFGEF3Q5TH69 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
ARFGEF3Q5TH69 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ARFGEF3Q5TH69 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ARFGEF3Q5TH69 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.05■□□□□ 0.32
ARFGEF3Q5TH69 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.05■□□□□ 0.32
ARFGEF3Q5TH69 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ARFGEF3Q5TH69 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.05■□□□□ 0.32
ARFGEF3Q5TH69 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
ARFGEF3Q5TH69 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.05■□□□□ 0.32
ARFGEF3Q5TH69 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ARFGEF3Q5TH69 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
ARFGEF3Q5TH69 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARFGEF3Q5TH69 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ARFGEF3Q5TH69 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
ARFGEF3Q5TH69 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARFGEF3Q5TH69 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.04■□□□□ 0.32
ARFGEF3Q5TH69 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ARFGEF3Q5TH69 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.04■□□□□ 0.32
ARFGEF3Q5TH69 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.04■□□□□ 0.32
ARFGEF3Q5TH69 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ARFGEF3Q5TH69 AL121829.2-201ENST00000620908 328 ntBASIC17.04■□□□□ 0.32
ARFGEF3Q5TH69 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.04■□□□□ 0.32
ARFGEF3Q5TH69 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ARFGEF3Q5TH69 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms